Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 Y_RNA.51-201ENST00000362725 102 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 RN7SKP115-201ENST00000363177 317 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 OR1L6-202ENST00000373684 1044 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SNORA67-201ENST00000384423 137 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SNORD56.6-201ENST00000384569 71 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 MIR649-201ENST00000384843 97 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 MT-TH-201ENST00000387441 69 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SNORA48.4-201ENST00000391089 134 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 NUDT19P3-201ENST00000404698 555 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 RPS3AP9-201ENST00000417027 792 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 RPL12P34-201ENST00000424532 479 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC012519.1-201ENST00000424588 610 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AL590762.4-201ENST00000425885 253 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC234779.1-201ENST00000425910 285 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 RPL12P18-201ENST00000437175 325 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AL389915.2-201ENST00000454576 441 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 APOOP2-201ENST00000461561 539 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC021660.1-201ENST00000465006 554 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC109462.1-201ENST00000491087 368 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AL049874.2-201ENST00000492636 288 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC114981.1-201ENST00000503897 678 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SNX5P1-201ENST00000505757 1041 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 HSPE1P23-201ENST00000509838 286 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 MTCYBP37-201ENST00000510642 1133 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC026412.2-201ENST00000512270 1075 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 HIGD1AP10-201ENST00000527837 282 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AP000790.1-201ENST00000528891 737 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC093765.1-201ENST00000603758 881 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AL451086.1-201ENST00000605596 223 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC243773.3-201ENST00000613270 256 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AL133243.1-201ENST00000614487 366 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC025574.2-201ENST00000615621 514 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 AC068722.2-201ENST00000618734 544 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 HSPA8P18-201ENST00000439846 1928 ntBASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA7Q9Y5G6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AC011978.2-201ENST00000569835 2054 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RPL21P132-201ENST00000331267 462 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 SNRPEP3-201ENST00000338402 276 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RNU6-462P-201ENST00000362659 105 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 Y_RNA.302-201ENST00000364997 102 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RNA5SP88-201ENST00000365560 109 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RNU1-149P-201ENST00000390870 161 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RPL23AP29-201ENST00000397284 453 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AL450338.1-201ENST00000407987 512 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AL139128.1-201ENST00000413921 941 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 ZNF885P-201ENST00000420174 1098 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 MTND1P20-201ENST00000430341 950 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RPL19P16-201ENST00000433839 588 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 THAP5P1-201ENST00000439089 262 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 CEACAMP9-201ENST00000442990 513 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AL137845.2-201ENST00000444292 988 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 SETP11-201ENST00000473027 690 ntBASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA7Q9Y5G6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms