Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC023043.4-201ENST00000612081 449 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC073342.3-201ENST00000624211 193 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 ZNF962P-201ENST00000443465 3140 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 IQCB2P-201ENST00000401788 1633 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC026951.1-201ENST00000559530 2459 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC090337.1-201ENST00000579651 2074 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MIR585-201ENST00000384887 94 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AP000357.1-201ENST00000409926 1165 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 NRBF2P2-201ENST00000413087 861 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MFSD13B-201ENST00000420133 1290 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MTND2P11-201ENST00000423638 648 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC093698.1-201ENST00000423843 571 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 CNOT7P1-201ENST00000429006 852 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC011742.1-201ENST00000431448 434 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AL512326.1-201ENST00000443050 721 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 RPL23AP81-201ENST00000455252 467 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 HMGN2P7-201ENST00000456186 273 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 RPL23AP24-201ENST00000458203 385 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 RPL37P6-202ENST00000464216 403 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MTND3P6-201ENST00000485242 339 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC013356.1-201ENST00000489027 564 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC106872.2-201ENST00000494303 480 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC146944.2-203ENST00000502493 354 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC139495.1-202ENST00000513164 354 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 RNU6-889P-201ENST00000517189 103 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 RNU4-60P-201ENST00000517239 135 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC008562.1-201ENST00000521763 330 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MIR4443-201ENST00000585052 53 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC019193.2-201ENST00000610012 634 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC233309.1-201ENST00000619522 751 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AL445363.3-201ENST00000623080 671 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 MIR4496-201ENST00000635896 61 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AC073429.2-201ENST00000569694 1444 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 AL133383.2-201ENST00000622958 2336 ntBASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RHBDD3Q9Y3P4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RHBDD3Q9Y3P4 AC139713.2-214ENST00000642059 1811 ntBASIC3.65□□□□□ -1.82
RHBDD3Q9Y3P4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RHBDD3Q9Y3P4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
RHBDD3Q9Y3P4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.65□□□□□ -1.82
RHBDD3Q9Y3P4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.65□□□□□ -1.82
RHBDD3Q9Y3P4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 RNA5SP391-201ENST00000363456 119 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 DNAJC19P6-201ENST00000401853 280 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 RNA5SP36-201ENST00000410197 133 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 RPS27AP7-201ENST00000422792 455 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 AC115285.1-201ENST00000424879 736 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 AL157831.1-201ENST00000426134 473 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 RPS29P17-201ENST00000430795 166 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 MRPS33P4-201ENST00000434892 317 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 AL138799.3-201ENST00000438968 350 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 FABP3P2-201ENST00000453169 399 ntBASIC3.65□□□□□ -1.83
RHBDD3Q9Y3P4 Z95152.1-201ENST00000453556 656 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms