Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC024595.1-201ENST00000623088 387 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 EIF2AP4-201ENST00000424793 1781 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC104446.1-201ENST00000613728 1321 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 MIR765-201ENST00000390226 114 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 RNU6-328P-201ENST00000390887 106 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 MTCO1P54-201ENST00000430139 712 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 ETF1P3-201ENST00000430422 1160 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 LYPLA1P1-201ENST00000434514 622 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 MTND4P15-201ENST00000437913 1033 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL356535.1-201ENST00000440335 398 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL162591.2-201ENST00000449634 317 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 HMGN2P7-201ENST00000456186 273 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 BNIP3P41-201ENST00000503774 571 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC008565.1-201ENST00000509046 885 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 C1DP5-201ENST00000525775 383 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 PTP4A1P6-201ENST00000531034 478 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC139103.1-201ENST00000534696 1030 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC063950.1-201ENST00000552036 308 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL109766.1-201ENST00000555080 552 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC007225.2-201ENST00000562529 256 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC016180.1-201ENST00000567945 403 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 MIR1269B-201ENST00000580405 75 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC090312.2-201ENST00000582687 378 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC079587.1-201ENST00000603846 277 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC098935.2-201ENST00000604222 466 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL021368.1-201ENST00000607490 540 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC105429.2-201ENST00000610567 517 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL021997.2-201ENST00000615674 271 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 MIR6891-201ENST00000618788 93 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AP006248.3-201ENST00000623580 594 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC091948.2-201ENST00000636510 279 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 SDAD1P1-202ENST00000524156 2051 ntBASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KCNIP3Q9Y2W7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 ENSAP3-201ENST00000312710 333 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 RNA5SP191-201ENST00000362585 102 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 SNORD6-201ENST00000365444 73 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 RNU6-1293P-201ENST00000384077 107 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AL391361.1-201ENST00000405580 489 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 RN7SKP100-201ENST00000411258 284 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AC092745.2-202ENST00000411880 369 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AC004987.3-201ENST00000413879 771 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 VN1R42P-201ENST00000424651 344 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 RBMY2QP-201ENST00000429799 1147 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AC092809.1-201ENST00000441469 474 ntBASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.53□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms