Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 AC062022.1-201ENST00000451026 1684 ntBASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 AC005618.1-201ENST00000606901 3148 ntBASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 NBPF8-201ENST00000583271 5330 ntBASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.69□□□□□ -1.18
HPS5Q9UPZ3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC074141.1-201ENST00000588129 2995 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AKAP17BP-201ENST00000431706 2719 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AL391262.1-201ENST00000556558 1992 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AL512646.1-201ENST00000269395 1077 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 Y_RNA.252-201ENST00000364556 101 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RNU6-169P-201ENST00000365336 107 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 Y_RNA.373-201ENST00000365600 103 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RNU6-746P-201ENST00000384112 109 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RNY1P14-201ENST00000384426 108 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 SNORD37.1-201ENST00000390968 65 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 U3.25-201ENST00000391209 220 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 SOD2P1-201ENST00000396543 562 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AL121835.1-201ENST00000404250 354 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RN7SKP216-201ENST00000411050 312 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC019097.1-201ENST00000424783 735 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RPL23AP30-201ENST00000432419 501 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RSU1P2-202ENST00000437884 485 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC097463.1-201ENST00000447288 481 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 NF1P3-201ENST00000457709 450 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AP002453.1-201ENST00000492327 668 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RPSAP51-201ENST00000497462 645 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 BTG4P1-201ENST00000510421 183 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RPL39P5-202ENST00000512505 151 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RNU6-1088P-201ENST00000516850 104 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC073581.1-201ENST00000519036 575 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 CYCSP25-201ENST00000525280 316 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC023157.2-201ENST00000540596 141 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC090651.1-201ENST00000567865 634 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC211433.2-201ENST00000608433 387 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AC010149.2-201ENST00000637608 315 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 AL049767.1-202ENST00000637826 242 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 SHQ1P1-201ENST00000437111 1544 ntBASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HPS5Q9UPZ3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 AL442128.2-201ENST00000620246 1824 ntBASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 Y_RNA.515-201ENST00000384535 112 ntBASIC7.67□□□□□ -1.18
HPS5Q9UPZ3 Y_RNA.530-201ENST00000384587 101 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms