Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 RPL23AP70-201ENST00000483361 460 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 OR8Q1P-201ENST00000526467 655 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AP001646.1-201ENST00000527936 915 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC084759.1-201ENST00000561168 290 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC010680.4-201ENST00000605334 543 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 AC009464.1-201ENST00000615731 469 ntBASIC1.53□□□□□ -2.16
MACF1Q9UPN3 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MACF1Q9UPN3 THAP12P8-201ENST00000447914 2115 ntBASIC1.53□□□□□ -2.17
MACF1Q9UPN3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 RNA5SP241-201ENST00000391326 114 ntBASIC1.53□□□□□ -2.17
MACF1Q9UPN3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 MIR7853-201ENST00000584820 132 ntBASIC1.53□□□□□ -2.17
MACF1Q9UPN3 AC005034.4-201ENST00000603612 899 ntBASIC1.53□□□□□ -2.17
MACF1Q9UPN3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 AC022031.1-201ENST00000585985 2593 ntBASIC1.53□□□□□ -2.17
MACF1Q9UPN3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.53□□□□□ -2.17
MACF1Q9UPN3 RNU4-35P-201ENST00000362588 141 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC007568.1-201ENST00000422912 471 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC012417.1-201ENST00000582307 1039 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AP005264.7-201ENST00000625003 745 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 HYDIN2-203ENST00000614586 13885 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ZNF962P-201ENST00000443465 3140 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC009852.2-201ENST00000567898 485 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AP000542.2-201ENST00000623199 6179 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 MIR499A-201ENST00000384903 122 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 SOD2P1-201ENST00000396543 562 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 NECAP1P2-201ENST00000455668 727 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 MTCYBP14-201ENST00000457471 715 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 RPL23AP12-201ENST00000467573 473 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC021193.1-201ENST00000511607 420 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AP002404.1-201ENST00000532005 451 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AL162713.1-201ENST00000604480 262 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC090971.4-201ENST00000560291 1800 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 HSPA8P19-201ENST00000505359 1517 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 SNORD96B-201ENST00000386148 79 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 FTH1P10-202ENST00000430907 550 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 AL035425.3-201ENST00000564206 4996 ntBASIC1.52□□□□□ -2.17
MACF1Q9UPN3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
MACF1Q9UPN3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms