Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AL022067.1-201ENST00000602426 454 ntBASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AC008536.1-201ENST00000602872 669 ntBASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 AC107021.2-201ENST00000567714 2095 ntBASIC4.39□□□□□ -1.71
SIX2Q9NPC8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX2Q9NPC8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 MTATP6P17-201ENST00000431030 672 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AL356276.2-201ENST00000435919 558 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC069285.2-201ENST00000440210 275 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC093840.1-201ENST00000511599 336 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC034205.1-201ENST00000520621 638 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC109635.6-201ENST00000525487 1113 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC009643.1-201ENST00000532030 391 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 CYCSP29-201ENST00000533731 318 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AL049870.4-201ENST00000555741 486 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 SULT1C2P2-201ENST00000562517 294 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AC112220.2-201ENST00000605513 533 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 MIR6820-201ENST00000611508 62 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AL445567.2-201ENST00000618935 498 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 MIR8059-201ENST00000620427 81 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 AL078595.3-201ENST00000623815 1166 ntBASIC4.38□□□□□ -1.71
SIX2Q9NPC8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
SIX2Q9NPC8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 CDC27P2-201ENST00000425026 1922 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 SNORA56-201ENST00000383966 129 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 RNU11-4P-201ENST00000391149 133 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 JKAMPP1-201ENST00000413804 919 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AL035458.1-201ENST00000433096 585 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AL009048.1-201ENST00000450437 298 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 HSPE1P22-201ENST00000456856 327 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 RPL7P1-201ENST00000468161 747 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 RPL7P9-201ENST00000468715 747 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC105137.1-201ENST00000484355 562 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 RN7SL604P-201ENST00000492589 296 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 HIGD1AP18-201ENST00000520730 278 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 C1GALT1P3-201ENST00000522049 819 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AP003730.1-201ENST00000524605 285 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AP003717.3-201ENST00000544832 1180 ntBASIC4.37□□□□□ -1.71
SIX2Q9NPC8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms