Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 VN1R105P-201ENST00000486595 910 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 snoU109.6-201ENST00000516831 118 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC090819.1-201ENST00000523800 1111 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC091516.1-201ENST00000549191 703 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 USP12PY-201ENST00000427677 1064 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AL500522.2-201ENST00000448562 343 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 RPS4XP15-201ENST00000489210 795 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 PAICSP4-201ENST00000517543 1253 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 NDUFA5P2-201ENST00000519723 344 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC093014.1-201ENST00000548926 724 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC090877.1-201ENST00000561418 344 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC112230.1-201ENST00000604342 547 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC007390.2-201ENST00000606229 3803 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 MIR486-1-201ENST00000612171 68 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC017007.4-201ENST00000503353 1352 ntBASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
UPF3BQ9BZI7 AC090971.4-201ENST00000560291 1800 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AP002001.2-201ENST00000529025 1469 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 RNU1-89P-201ENST00000384592 164 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 RPL21P65-201ENST00000406094 466 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 RPS29P7-201ENST00000439662 171 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AL133244.1-201ENST00000456007 258 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 TRBV8-1-201ENST00000481590 279 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC018797.3-201ENST00000513388 1241 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 RNA5SP208-201ENST00000516156 78 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 RN7SKP157-201ENST00000516174 282 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AL390816.3-201ENST00000604527 1066 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 SNORA51-201ENST00000606420 132 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 AL359715.5-201ENST00000623431 443 ntBASIC4.62□□□□□ -1.67
UPF3BQ9BZI7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 RNA5SP322-201ENST00000363617 119 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 SNORA9-201ENST00000384215 133 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AC010740.1-201ENST00000417035 684 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 OR8F1P-201ENST00000425243 930 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AL035246.1-201ENST00000433554 1255 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 ATP5HP2-201ENST00000433885 485 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AC022431.1-201ENST00000450941 438 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AL133477.1-201ENST00000457472 514 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 PPIAP15-201ENST00000479662 484 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms