Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL022393.1-201ENST00000625142 1677 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RNU6-1042P-201ENST00000384204 107 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP91-201ENST00000390902 119 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AK4P4-201ENST00000419465 646 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 FNDC3CP-201ENST00000420795 1155 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL590609.2-201ENST00000421430 368 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL356583.2-201ENST00000426536 280 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC099677.3-201ENST00000427081 395 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 MTND1P4-201ENST00000435196 415 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL161636.2-201ENST00000445179 927 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 PDSS1P2-201ENST00000449397 678 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC016027.4-201ENST00000450866 277 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 OR6K1P-201ENST00000456766 971 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RPL31P50-201ENST00000471002 296 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL136126.1-201ENST00000473603 402 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC074386.1-201ENST00000476560 767 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC022447.3-201ENST00000506865 495 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC024589.1-201ENST00000512207 263 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP434-201ENST00000516647 121 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AP003396.4-201ENST00000527574 265 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 ZNF519P3-201ENST00000557158 1032 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 MIR4528-201ENST00000577763 90 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 MIR5697-201ENST00000578045 78 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AP001180.3-201ENST00000582221 145 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 MIR4307-201ENST00000582802 84 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC080013.4-201ENST00000607624 649 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL159169.3-201ENST00000608871 561 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC108673.3-201ENST00000609183 335 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 MIR6768-201ENST00000610734 72 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC096861.1-201ENST00000616652 240 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC245014.3-201ENST00000618589 347 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC015908.5-201ENST00000623289 343 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AC097504.1-201ENST00000515103 2415 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 RBMY1HP-201ENST00000382759 1389 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 DCAF13P1-201ENST00000495256 1330 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC002525.1-201ENST00000624392 1622 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC011978.2-201ENST00000569835 2054 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AL132875.1-201ENST00000403623 949 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 MIR1305-201ENST00000408300 86 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP156-201ENST00000410250 110 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 COX6CP17-201ENST00000421389 185 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 OR10T1P-201ENST00000424327 947 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 HMGN2P27-201ENST00000427352 270 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC109583.1-201ENST00000432156 268 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 RPL12P46-201ENST00000436610 195 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AL022238.1-201ENST00000442557 355 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 USP9YP34-201ENST00000453983 808 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 BX322784.1-201ENST00000455793 1077 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 RNU1-88P-201ENST00000459274 128 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 SNORD42A-201ENST00000459584 64 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 RPL37P25-201ENST00000507308 276 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms