Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC008897.1-201ENST00000494006 347 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC104164.2-201ENST00000496953 495 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC015795.1-201ENST00000513669 327 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 OR5M7P-201ENST00000526140 972 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 OR4C2P-201ENST00000530855 1064 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 RN7SL652P-201ENST00000577769 300 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC091488.1-201ENST00000604239 660 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AL391358.1-201ENST00000605342 190 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AL450270.1-201ENST00000606160 391 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC092608.3-201ENST00000625017 386 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AC097504.1-201ENST00000515103 2415 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 AL157700.1-201ENST00000561973 1432 ntBASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRDL1Q9BU40 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 SAGE4P-201ENST00000442271 3381 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 MAPK10-263ENST00000641052 4307 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 RNA5SP27-201ENST00000363839 119 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 RHOT1P2-201ENST00000366423 333 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 MIR93-201ENST00000385024 80 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 SNORA40.4-201ENST00000390971 128 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 EIF5P1-201ENST00000400019 1231 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 RN7SKP100-201ENST00000411258 284 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC073310.1-201ENST00000423226 1033 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC073335.1-201ENST00000427776 363 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC093422.3-201ENST00000428506 305 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC005154.2-201ENST00000438110 379 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC006466.1-201ENST00000438721 289 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC004865.1-201ENST00000442276 1003 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 RPL7P33-201ENST00000444159 742 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC108463.1-201ENST00000450258 347 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 ANP32BP2-201ENST00000454525 545 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 NDUFB4P9-201ENST00000511646 388 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC016065.2-201ENST00000514530 444 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 SOX5P1-201ENST00000524155 1127 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 BRD9P1-201ENST00000529855 560 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC209154.1-201ENST00000582156 337 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 MIR4480-201ENST00000582492 71 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AL512782.1-201ENST00000603093 364 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC008638.3-201ENST00000603341 463 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 YWHAQP7-201ENST00000603536 658 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 FAM25E-202ENST00000608562 189 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 FRG1HP-204ENST00000617940 757 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 MIR6853-201ENST00000619642 74 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC091953.3-201ENST00000623220 236 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AP003400.6-201ENST00000624698 740 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 MTND4P8-201ENST00000514997 1362 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 AC107081.3-201ENST00000612715 2034 ntBASIC3.6□□□□□ -1.83
CHRDL1Q9BU40 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms