Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.14□□□□□ -1.59
SMOQ99835 Z93242.1-201ENST00000427102 353 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 AL353706.1-201ENST00000436728 494 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AC006466.1-201ENST00000438721 289 ntBASIC5.14□□□□□ -1.59
SMOQ99835 NPM1P33-201ENST00000438918 872 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.14□□□□□ -1.59
SMOQ99835 RN7SL517P-201ENST00000462240 305 ntBASIC5.14□□□□□ -1.59
SMOQ99835 SETP11-201ENST00000473027 690 ntBASIC5.14□□□□□ -1.59
SMOQ99835 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 RN7SKP31-201ENST00000516354 278 ntBASIC5.14□□□□□ -1.59
SMOQ99835 NDUFA5P2-201ENST00000519723 344 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 RPL23AP53-201ENST00000521854 457 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMOQ99835 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMOQ99835 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.14□□□□□ -1.59
SMOQ99835 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.14□□□□□ -1.59
SMOQ99835 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 OR4K7P-201ENST00000580232 945 ntBASIC5.14□□□□□ -1.59
SMOQ99835 RSL24D1P11-201ENST00000591045 491 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC068790.6-201ENST00000602558 258 ntBASIC5.14□□□□□ -1.59
SMOQ99835 WISP1-OT1-201ENST00000602893 642 ntBASIC5.14□□□□□ -1.59
SMOQ99835 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
SMOQ99835 AP000648.2-201ENST00000624182 404 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC015726.3-201ENST00000624501 418 ntBASIC5.14□□□□□ -1.59
SMOQ99835 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMOQ99835 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.14□□□□□ -1.59
SMOQ99835 DDX18P4-201ENST00000511690 1966 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC112198.2-201ENST00000426589 6996 ntBASIC5.14□□□□□ -1.59
SMOQ99835 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.14□□□□□ -1.59
SMOQ99835 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 AC092104.1-201ENST00000497346 1441 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AC009643.2-201ENST00000603543 1448 ntBASIC5.14□□□□□ -1.59
SMOQ99835 NCLP2-201ENST00000416078 1462 ntBASIC5.13□□□□□ -1.59
SMOQ99835 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMOQ99835 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMOQ99835 AP000473.2-201ENST00000602659 1537 ntBASIC5.13□□□□□ -1.59
SMOQ99835 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMOQ99835 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
SMOQ99835 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
SMOQ99835 RNU6-839P-201ENST00000363347 108 ntBASIC5.13□□□□□ -1.59
SMOQ99835 RNU6-317P-201ENST00000384031 107 ntBASIC5.13□□□□□ -1.59
SMOQ99835 MIR585-201ENST00000384887 94 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AL161909.1-201ENST00000397390 712 ntBASIC5.13□□□□□ -1.59
SMOQ99835 RNU2-42P-201ENST00000410697 113 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 AL645608.4-201ENST00000423619 154 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC012519.1-201ENST00000424588 610 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 OR2B7P-201ENST00000429302 934 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 YWHAQP9-201ENST00000445891 512 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 AL035551.1-201ENST00000446931 348 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AP000936.2-201ENST00000447151 681 ntBASIC5.13□□□□□ -1.59
SMOQ99835 MTND1P27-201ENST00000451117 902 ntBASIC5.13□□□□□ -1.59
SMOQ99835 PNPLA4P1-201ENST00000458328 305 ntBASIC5.13□□□□□ -1.59
SMOQ99835 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 MTND1P16-201ENST00000465177 898 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AL161747.1-201ENST00000480068 358 ntBASIC5.13□□□□□ -1.59
SMOQ99835 ACTG1P13-201ENST00000486987 1043 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC068724.1-201ENST00000487100 792 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.13□□□□□ -1.59
SMOQ99835 RNA5SP230-201ENST00000517039 122 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.13□□□□□ -1.59
SMOQ99835 EIF4A2P5-201ENST00000529914 499 ntBASIC5.13□□□□□ -1.59
SMOQ99835 GTF2IP8-201ENST00000560687 584 ntBASIC5.13□□□□□ -1.59
SMOQ99835 UBE2FP2-201ENST00000566646 462 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC012435.1-202ENST00000568772 240 ntBASIC5.13□□□□□ -1.59
SMOQ99835 MIR3667-201ENST00000581025 74 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.13□□□□□ -1.59
SMOQ99835 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMOQ99835 AL133243.1-201ENST00000614487 366 ntBASIC5.13□□□□□ -1.59
SMOQ99835 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.13□□□□□ -1.59
SMOQ99835 AC023509.5-201ENST00000617434 807 ntBASIC5.13□□□□□ -1.59
SMOQ99835 AC016717.3-201ENST00000624730 554 ntBASIC5.13□□□□□ -1.59
SMOQ99835 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.13□□□□□ -1.59
SMOQ99835 AC084035.1-201ENST00000634543 607 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms