Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SKP1P1-201ENST00000438081 489 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 HMGB1P37-201ENST00000439613 609 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 TXNP2-201ENST00000443918 295 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 FCF1P7-201ENST00000451185 558 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 CALM1P2-201ENST00000452941 448 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC018638.3-201ENST00000461273 132 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC092691.2-201ENST00000461787 803 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 RN7SL691P-201ENST00000494487 301 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 RPL5P23-201ENST00000496040 868 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 HAUS1P1-201ENST00000505275 832 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 IGBP1P5-201ENST00000507524 1000 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC093824.1-201ENST00000508796 343 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC008958.1-201ENST00000511047 682 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 MIR4436B2-201ENST00000581415 91 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 MIR4436B1-201ENST00000583272 91 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 OR7E18P-201ENST00000592589 702 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AC093765.1-201ENST00000603758 881 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 FAM25E-202ENST00000608562 189 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 RMST_8.1-201ENST00000610287 165 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 MIR6780A-201ENST00000615089 68 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 AP003400.2-201ENST00000624036 666 ntBASIC2.91□□□□□ -1.94
AP1S3Q96PC3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
AP1S3Q96PC3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
AP1S3Q96PC3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
AP1S3Q96PC3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
AP1S3Q96PC3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 RNA5SP167-201ENST00000365461 116 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 HLFP1-201ENST00000402375 499 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 PRELID3BP11-201ENST00000414230 479 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 USP9YP9-201ENST00000429406 715 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 UBE2V2P1-201ENST00000434717 398 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC009963.2-201ENST00000453431 138 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 CYCSP20-201ENST00000473154 315 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC023050.1-201ENST00000498198 304 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 KRT19P6-201ENST00000510983 209 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 TRAV37-201ENST00000553906 342 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AL133247.2-201ENST00000603236 482 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC107294.3-201ENST00000609211 526 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AL512624.1-201ENST00000613638 469 ntBASIC2.9□□□□□ -1.95
AP1S3Q96PC3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AP1S3Q96PC3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 MIR105-2-201ENST00000385083 81 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 RPL23AP59-201ENST00000399415 461 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 AL034374.1-201ENST00000406329 351 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 NRBF2P2-201ENST00000413087 861 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 CHIAP3-201ENST00000423668 1133 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 OR5BE1P-201ENST00000425977 939 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.89□□□□□ -1.95
AP1S3Q96PC3 NPM1P34-201ENST00000428821 893 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 COX6B1P7-201ENST00000430845 235 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 AL358472.1-201ENST00000431295 329 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 ACTR3P2-201ENST00000439585 1257 ntBASIC2.89□□□□□ -1.95
AP1S3Q96PC3 RPS4XP4-201ENST00000443195 763 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms