Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR183-201ENST00000384958 110 ntBASIC5.19□□□□□ -1.58
USP47Q96K76 HMGB3P20-201ENST00000417997 600 ntBASIC5.19□□□□□ -1.58
USP47Q96K76 RN7SKP209-201ENST00000516888 304 ntBASIC5.19□□□□□ -1.58
USP47Q96K76 AC092747.2-201ENST00000545069 983 ntBASIC5.19□□□□□ -1.58
USP47Q96K76 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.19□□□□□ -1.58
USP47Q96K76 AC006272.2-201ENST00000594725 163 ntBASIC5.19□□□□□ -1.58
USP47Q96K76 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.19□□□□□ -1.58
USP47Q96K76 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.19□□□□□ -1.58
USP47Q96K76 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP47Q96K76 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP47Q96K76 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP47Q96K76 RNA5SP72-201ENST00000364442 117 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP47Q96K76 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP47Q96K76 SNORA81-201ENST00000408493 178 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.18□□□□□ -1.58
USP47Q96K76 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.18□□□□□ -1.58
USP47Q96K76 MOB1AP1-201ENST00000430903 535 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.18□□□□□ -1.58
USP47Q96K76 PRDX3P3-201ENST00000447765 522 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.18□□□□□ -1.58
USP47Q96K76 AC018635.1-201ENST00000468292 1030 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
USP47Q96K76 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.18□□□□□ -1.58
USP47Q96K76 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.18□□□□□ -1.58
USP47Q96K76 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.18□□□□□ -1.58
USP47Q96K76 AL360157.1-201ENST00000565962 87 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 AF131215.7-201ENST00000602443 707 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.18□□□□□ -1.58
USP47Q96K76 AC016957.2-201ENST00000616998 848 ntBASIC5.18□□□□□ -1.58
USP47Q96K76 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.18□□□□□ -1.58
USP47Q96K76 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP47Q96K76 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
USP47Q96K76 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP47Q96K76 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP47Q96K76 HMGN2P8-201ENST00000391458 268 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 RNU2-65P-201ENST00000410162 185 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 MTND2P25-201ENST00000449028 610 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.17□□□□□ -1.58
USP47Q96K76 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.17□□□□□ -1.58
USP47Q96K76 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.17□□□□□ -1.58
USP47Q96K76 KCTD9P6-201ENST00000522306 950 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 OR8I1P-201ENST00000529291 931 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.17□□□□□ -1.58
USP47Q96K76 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.17□□□□□ -1.58
USP47Q96K76 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.17□□□□□ -1.58
USP47Q96K76 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 AL161912.3-201ENST00000605404 628 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 BRDTP1-201ENST00000605735 677 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 RNU6-84P-201ENST00000607737 102 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 U6.105-201ENST00000637379 88 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP47Q96K76 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP47Q96K76 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.17□□□□□ -1.58
USP47Q96K76 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP47Q96K76 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.17□□□□□ -1.58
USP47Q96K76 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
USP47Q96K76 RNU1-18P-201ENST00000363062 164 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 RPS29P4-201ENST00000414733 161 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.16□□□□□ -1.58
USP47Q96K76 MTND6P5-201ENST00000448266 512 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.16□□□□□ -1.58
USP47Q96K76 RPL23AP71-201ENST00000470966 469 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 CDH12P2-201ENST00000504393 298 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.16□□□□□ -1.58
USP47Q96K76 AC023161.2-201ENST00000551218 780 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.16□□□□□ -1.58
USP47Q96K76 AC006960.3-201ENST00000561845 705 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AC005412.1-201ENST00000580812 1049 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.16□□□□□ -1.58
USP47Q96K76 U3.45-201ENST00000607547 219 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AC007823.1-201ENST00000569932 1566 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP47Q96K76 MTCO1P7-201ENST00000419523 1542 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
USP47Q96K76 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.16□□□□□ -1.58
USP47Q96K76 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.16□□□□□ -1.58
USP47Q96K76 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.16□□□□□ -1.58
USP47Q96K76 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP47Q96K76 AC116158.1-201ENST00000560231 2129 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.16□□□□□ -1.58
USP47Q96K76 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.16□□□□□ -1.58
USP47Q96K76 VN1R96P-201ENST00000446052 858 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 RPS3AP46-201ENST00000448352 682 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.16□□□□□ -1.58
USP47Q96K76 RPL23AP12-201ENST00000467573 473 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 SYT14P1-201ENST00000481459 721 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 CAB39P1-201ENST00000502277 460 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AC026427.2-201ENST00000506228 536 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 RANP9-201ENST00000519957 271 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AC008489.1-201ENST00000524271 483 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.16□□□□□ -1.58
USP47Q96K76 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.16□□□□□ -1.58
USP47Q96K76 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms