Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 RNA5SP154-201ENST00000516193 111 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 OR5AZ1P-201ENST00000527448 943 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 MIR4666A-201ENST00000580160 79 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 MIR4310-201ENST00000582950 57 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL020997.3-201ENST00000602843 359 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 RPAP2P1-201ENST00000603626 1168 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 SUMO2P15-201ENST00000604285 278 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 RNA5SP108-201ENST00000605921 117 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 VN1R7P-201ENST00000619242 903 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL049777.1-201ENST00000622740 518 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 AL122126.1-201ENST00000546905 1318 ntBASIC4.38□□□□□ -1.71
VPS33AQ96AX1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VPS33AQ96AX1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 RNA5SP123-201ENST00000363244 119 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 OR1L1-202ENST00000373686 1083 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 SFR1P1-201ENST00000403720 688 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AL078604.1-201ENST00000404609 466 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 RPS3AP9-201ENST00000417027 792 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 RPL29P29-201ENST00000448725 423 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC073850.1-201ENST00000449243 255 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC104306.1-201ENST00000449702 371 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 ISCUP1-201ENST00000454451 448 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 RPL23AP2-201ENST00000471227 466 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC087879.1-201ENST00000474343 374 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC006499.3-201ENST00000506077 748 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC008694.2-201ENST00000517591 306 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 OR10G5P-201ENST00000532733 358 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 MIR4504-201ENST00000577413 92 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC103792.1-201ENST00000603591 919 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AP002360.3-201ENST00000607673 710 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC091905.2-201ENST00000623143 306 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC091905.4-201ENST00000623432 202 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 ELL2P4-201ENST00000446870 1376 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 MAPK10-263ENST00000641052 4307 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 C4BPAP1-201ENST00000415474 1893 ntBASIC4.37□□□□□ -1.71
VPS33AQ96AX1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS33AQ96AX1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNA5SP191-201ENST00000362585 102 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNA5SP435-201ENST00000364044 108 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS33AQ96AX1 RNU6-356P-201ENST00000384140 107 ntBASIC4.36□□□□□ -1.71
VPS33AQ96AX1 MIR124-3-201ENST00000384866 87 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms