Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AL356490.1-201ENST00000623079 479 ntBASIC3.87□□□□□ -1.79
UBE2E3Q969T4 AC124312.6-202ENST00000623624 418 ntBASIC3.87□□□□□ -1.79
UBE2E3Q969T4 AC090506.2-201ENST00000624521 419 ntBASIC3.87□□□□□ -1.79
UBE2E3Q969T4 AC024023.1-201ENST00000624530 922 ntBASIC3.87□□□□□ -1.79
UBE2E3Q969T4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 OR52H1-202ENST00000641796 1061 ntBASIC3.87□□□□□ -1.79
UBE2E3Q969T4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBE2E3Q969T4 IPO8P1-201ENST00000455509 3109 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC074029.4-201ENST00000624796 1859 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 MIR142-201ENST00000384835 87 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 RPS26P8-201ENST00000393490 348 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 RNA5SP306-201ENST00000411087 107 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC016397.1-201ENST00000412463 242 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 CABYRP1-201ENST00000465493 1045 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC010618.1-201ENST00000469924 477 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 RPL31P61-201ENST00000496160 376 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC139783.2-201ENST00000504847 1145 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 VTA1P2-201ENST00000520205 911 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC090819.1-201ENST00000523800 1111 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 CYCSP29-201ENST00000533731 318 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 DYNLL1P4-201ENST00000549314 266 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 POLR2KP1-201ENST00000553226 168 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AL121594.4-201ENST00000556211 1196 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC106785.3-201ENST00000564064 847 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 MTND4LP24-201ENST00000572277 291 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 KPNA2P3-201ENST00000584190 848 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 NF1P5-201ENST00000588287 448 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AF230666.2-201ENST00000602328 725 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 RNU4-89P-201ENST00000607443 133 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AL445423.1-201ENST00000609941 536 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AL592437.2-201ENST00000421655 2434 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 MTND4P31-201ENST00000425607 1343 ntBASIC3.86□□□□□ -1.79
UBE2E3Q969T4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE2E3Q969T4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 AC087650.1-201ENST00000431445 468 ntBASIC3.85□□□□□ -1.79
UBE2E3Q969T4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 ATP5HP2-201ENST00000433885 485 ntBASIC3.85□□□□□ -1.79
UBE2E3Q969T4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 HMGB1P37-201ENST00000439613 609 ntBASIC3.85□□□□□ -1.79
UBE2E3Q969T4 RPS15AP29-201ENST00000445539 400 ntBASIC3.85□□□□□ -1.79
UBE2E3Q969T4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 MTND2P25-201ENST00000449028 610 ntBASIC3.85□□□□□ -1.79
UBE2E3Q969T4 RPL7P31-201ENST00000450192 724 ntBASIC3.85□□□□□ -1.79
UBE2E3Q969T4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UBE2E3Q969T4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms