Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOPBP1Q92547 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TOPBP1Q92547 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOPBP1Q92547 CCRL1P1-201ENST00000449542 1053 ntBASIC5.98□□□□□ -1.45
TOPBP1Q92547 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.98□□□□□ -1.45
TOPBP1Q92547 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.98□□□□□ -1.45
TOPBP1Q92547 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.98□□□□□ -1.45
TOPBP1Q92547 TRAV15-201ENST00000556680 249 ntBASIC5.98□□□□□ -1.45
TOPBP1Q92547 AC034105.3-201ENST00000565294 442 ntBASIC5.98□□□□□ -1.45
TOPBP1Q92547 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.98□□□□□ -1.45
TOPBP1Q92547 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TOPBP1Q92547 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 ZNF807-201ENST00000328088 1707 ntBASIC5.97□□□□□ -1.45
TOPBP1Q92547 ANKRD36P1-201ENST00000344424 659 ntBASIC5.97□□□□□ -1.45
TOPBP1Q92547 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 NPM1P37-201ENST00000403105 874 ntBASIC5.97□□□□□ -1.45
TOPBP1Q92547 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 HMGB1P21-201ENST00000502313 581 ntBASIC5.97□□□□□ -1.45
TOPBP1Q92547 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 AC023141.12-201ENST00000512399 199 ntBASIC5.97□□□□□ -1.45
TOPBP1Q92547 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 IGKV2-26-201ENST00000518305 343 ntBASIC5.97□□□□□ -1.45
TOPBP1Q92547 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOPBP1Q92547 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TOPBP1Q92547 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.96□□□□□ -1.45
TOPBP1Q92547 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TOPBP1Q92547 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.96□□□□□ -1.45
TOPBP1Q92547 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOPBP1Q92547 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 NPM1P25-201ENST00000429734 854 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 MIR4276-201ENST00000584832 70 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 AL451007.1-201ENST00000595491 289 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 AC084036.1-201ENST00000609190 508 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 OR5AC4P-202ENST00000642086 985 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TOPBP1Q92547 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOPBP1Q92547 MFSD8-233ENST00000641482 4860 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.96□□□□□ -1.46
TOPBP1Q92547 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOPBP1Q92547 AC024341.1-201ENST00000526444 1552 ntBASIC5.96□□□□□ -1.46
TOPBP1Q92547 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 NDUFB1P1-201ENST00000435191 180 ntBASIC5.95□□□□□ -1.46
TOPBP1Q92547 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 RPL21P8-201ENST00000465083 535 ntBASIC5.95□□□□□ -1.46
TOPBP1Q92547 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 AC005476.1-201ENST00000554427 397 ntBASIC5.95□□□□□ -1.46
TOPBP1Q92547 AC007066.2-202ENST00000566531 914 ntBASIC5.95□□□□□ -1.46
TOPBP1Q92547 AC006504.3-201ENST00000586818 523 ntBASIC5.95□□□□□ -1.46
TOPBP1Q92547 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 AC127502.3-201ENST00000636170 1206 ntBASIC5.95□□□□□ -1.46
TOPBP1Q92547 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOPBP1Q92547 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TOPBP1Q92547 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.95□□□□□ -1.46
TOPBP1Q92547 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOPBP1Q92547 RN7SKP74-201ENST00000362849 309 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 HIGD1AP12-201ENST00000427832 281 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC008065.1-201ENST00000428525 348 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 MTND6P32-201ENST00000457611 483 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC010653.1-201ENST00000571108 881 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AL157762.1-201ENST00000619612 415 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AL732618.1-201ENST00000623251 301 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 AP003355.3-201ENST00000623465 114 ntBASIC5.94□□□□□ -1.46
TOPBP1Q92547 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.94□□□□□ -1.46
TOPBP1Q92547 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TOPBP1Q92547 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms