Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RBMY2UP-201ENST00000453474 324 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 GOLGA5P1-201ENST00000507317 980 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 RAC1P2-201ENST00000511164 579 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC125494.3-201ENST00000602759 455 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC093719.1-202ENST00000392735 373 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 VDAC1P9-201ENST00000412766 841 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 RPS23P10-201ENST00000416185 486 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 RPL26P28-201ENST00000451325 435 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC090151.1-201ENST00000520784 730 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 OR5M7P-201ENST00000526140 972 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AL451007.1-201ENST00000595491 289 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AL603766.1-201ENST00000407763 664 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 SETD6P1-201ENST00000444575 317 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC008966.2-201ENST00000606157 453 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AL133383.2-201ENST00000622958 2336 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ALMS1Q8TCU4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 RNU4-35P-201ENST00000362588 141 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 MIR199A2-201ENST00000385289 110 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 BX323014.1-201ENST00000412876 237 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 RPL23AP25-201ENST00000430973 463 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 AC087650.1-201ENST00000431445 468 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 RPL21P110-201ENST00000433345 446 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 AC018442.3-201ENST00000523025 183 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 MIR5004-201ENST00000579078 107 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 RMST_9.1-201ENST00000619945 193 ntBASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.53□□□□□ -2.01
ALMS1Q8TCU4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 RPS27AP1-201ENST00000475545 471 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC006517.1-201ENST00000480485 328 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC103843.2-201ENST00000530523 682 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC023509.5-201ENST00000617434 807 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 MIR4727-201ENST00000622232 55 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC006386.2-201ENST00000624491 75 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC012005.1-201ENST00000624575 75 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC067945.1-201ENST00000342609 618 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 VDAC2P1-201ENST00000399358 958 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 GSTM3P2-201ENST00000412746 530 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AP001992.1-205ENST00000462248 379 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 RPL21P10-201ENST00000463521 490 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 RPL31P61-201ENST00000496160 376 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 SNORA70.17-201ENST00000516449 133 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC006023.1-201ENST00000603944 259 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 MIR8057-201ENST00000620957 69 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC024341.1-201ENST00000526444 1552 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms