Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC092650.2-201ENST00000619984 902 ntBASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 C2orf27A-204ENST00000623058 969 ntBASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.12□□□□□ -1.43
SHKBP1Q8TBC3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 OR52B1P-201ENST00000316506 909 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 Y_RNA.133-201ENST00000363428 110 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 MIR217-201ENST00000384817 110 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 MIR559-201ENST00000385188 96 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 MYL6P5-201ENST00000412707 459 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 HMGA1P8-201ENST00000414130 321 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 OR1AA1P-201ENST00000419597 916 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 NME1P1-201ENST00000420914 382 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 GTF2IP20-201ENST00000431663 360 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AL591212.2-201ENST00000433923 257 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 RNU6-420P-201ENST00000458780 107 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC091564.1-201ENST00000464563 479 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AL355032.1-201ENST00000472981 438 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC022215.1-201ENST00000481770 362 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 CCDC34P1-201ENST00000507441 517 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC093677.1-201ENST00000514414 678 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 RNU6-615P-201ENST00000516065 106 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 RNU6-416P-201ENST00000516265 103 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 IGKV2-18-201ENST00000522607 343 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 HMGB1P42-201ENST00000532126 553 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC012507.3-201ENST00000603556 477 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 RMST_7.1-201ENST00000621935 268 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 CU639417.4-201ENST00000623928 207 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC091905.1-201ENST00000624400 311 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AC138907.8-201ENST00000623981 2256 ntBASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHKBP1Q8TBC3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 GDI2P1-201ENST00000429312 1336 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 RNU6-331P-201ENST00000384724 107 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 RN7SKP151-201ENST00000410230 316 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 RNU6-77P-201ENST00000410554 91 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 RPA2P2-201ENST00000419698 796 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 EIF1P3-201ENST00000423841 334 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 Z93242.1-201ENST00000427102 353 ntBASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.1□□□□□ -1.43
SHKBP1Q8TBC3 AL663074.2-201ENST00000440621 479 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms