Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 RNU11-4P-201ENST00000391149 133 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC234779.1-201ENST00000425910 285 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC068287.1-201ENST00000430283 295 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC087650.1-201ENST00000431445 468 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC011742.1-201ENST00000431448 434 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 GSTA7P-201ENST00000438425 448 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 CBX1P4-201ENST00000439415 457 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 PPIAP3-201ENST00000450588 505 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 RPS20P32-201ENST00000456044 356 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 RPL23AP62-201ENST00000463396 453 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC104629.2-201ENST00000468627 598 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 RPS29P22-201ENST00000472363 168 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC078817.1-201ENST00000492623 435 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 CCNHP1-201ENST00000513311 678 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 MIR2114-201ENST00000516645 80 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 MIR4330-201ENST00000579077 105 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC020910.2-201ENST00000603635 610 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 ARF4P1-201ENST00000605447 541 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC055764.2-201ENST00000610089 670 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 MIR7151-201ENST00000617477 60 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 USP8P1-201ENST00000494673 3183 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 LARP1BP1-201ENST00000506036 1359 ntBASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RNA5SP366-201ENST00000365454 123 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 MIR153-1-201ENST00000384914 90 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RPS4XP9-201ENST00000405151 780 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC004022.2-201ENST00000413824 193 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 MTND2P15-201ENST00000418575 892 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 OR5BE1P-201ENST00000425977 939 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AL031736.2-201ENST00000426573 787 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AL392003.1-201ENST00000434394 243 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 VN1R48P-201ENST00000448149 1036 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 MTND2P25-201ENST00000449028 610 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RPL7P1-201ENST00000468161 747 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RPL7P9-201ENST00000468715 747 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RPL5P23-201ENST00000496040 868 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 HMGB1P50-201ENST00000605814 607 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AL590410.1-201ENST00000617925 333 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC010435.1-201ENST00000623353 1177 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 AC015726.3-201ENST00000624501 418 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 OR5BE1P-202ENST00000641168 1176 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 GABPAP-201ENST00000419271 1356 ntBASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
CLHC1Q8NHS4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms