Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC068714.1-201ENST00000559623 800 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC020910.2-201ENST00000603635 610 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AL031666.3-201ENST00000609320 1006 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 MIR7702-201ENST00000621931 59 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 ERCC6-202ENST00000374127 1782 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 BX005019.1-201ENST00000561881 1810 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC097504.1-201ENST00000515103 2415 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 OR11H4-201ENST00000315409 1082 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 SNORA62.2-201ENST00000364672 152 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RNU1-13P-201ENST00000384499 162 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RNU6-796P-201ENST00000391086 107 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RNA5SP39-201ENST00000411245 120 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RAC1P3-201ENST00000416129 580 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AL356095.1-201ENST00000417217 199 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 NANOGP6-201ENST00000429190 847 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RPS27AP12-201ENST00000429552 465 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 UBE2V1P6-201ENST00000430840 422 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 HLA-N-201ENST00000437516 135 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC097499.1-201ENST00000444277 208 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC099063.2-201ENST00000446360 662 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC114755.5-201ENST00000447760 831 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 CLIC4P1-201ENST00000453177 535 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 RPL36AP13-201ENST00000457490 317 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 MTCO2P9-201ENST00000503214 694 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 KRT19P6-201ENST00000510983 209 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC090079.2-201ENST00000575289 768 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC015911.5-201ENST00000587076 451 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC018618.2-201ENST00000604770 446 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 MIR432-201ENST00000606207 94 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC095038.2-201ENST00000621464 1070 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AP002967.1-201ENST00000624203 539 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 AC080188.3-201ENST00000624842 748 ntBASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C9orf40Q8IXQ3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 GTF2H2B-203ENST00000508065 1432 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 MIR16-2-201ENST00000362117 81 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RNA5SP502-201ENST00000362694 119 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 SNORD74.4-201ENST00000364129 80 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RNU6-304P-201ENST00000364855 107 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RNU6-1005P-201ENST00000384519 107 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 ENSAP1-201ENST00000392855 326 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 TPT1P2-201ENST00000413105 503 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 LINC01881-201ENST00000416103 412 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 VN1R42P-201ENST00000424651 344 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 UBE2D3P3-201ENST00000426992 425 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 OR4C10P-201ENST00000434991 931 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RPL7P1-201ENST00000468161 747 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RPL7P9-201ENST00000468715 747 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms