Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC144833.1-201ENST00000567953 4089 ntBASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.53
TRIM48Q8IWZ4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-115P-201ENST00000364310 107 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 RN7SKP186-201ENST00000365371 303 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 TMBIM7P-201ENST00000418074 855 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 ZYG11AP1-201ENST00000430329 837 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 BTF3P10-201ENST00000433415 495 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC012075.1-201ENST00000436549 580 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 SPRYD7P1-201ENST00000443861 570 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AL450023.1-201ENST00000450868 751 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 RPL12P39-201ENST00000455456 496 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AL672167.3-201ENST00000465951 960 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AL133445.1-201ENST00000467051 452 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC108693.1-201ENST00000496068 432 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC093824.1-201ENST00000508796 343 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 MTND5P4-201ENST00000514978 288 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AF279873.1-201ENST00000523393 313 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 PMS2P3-207ENST00000529061 717 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC137800.2-201ENST00000574375 120 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 MIR5697-201ENST00000578045 78 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 BNIP3P8-201ENST00000597863 560 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 BNIP3P33-201ENST00000598912 569 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AP000907.4-201ENST00000604143 237 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC092954.2-201ENST00000609103 430 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC131902.3-201ENST00000611767 581 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC025253.1-201ENST00000613623 543 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 MIR8080-201ENST00000622224 89 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC132068.1-201ENST00000623805 459 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 DCAF13P1-201ENST00000495256 1330 ntBASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM48Q8IWZ4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC005005.4-201ENST00000623789 16698 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-462P-201ENST00000362659 105 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-797P-201ENST00000363101 109 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 Y_RNA.372-201ENST00000365599 102 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 MIR137-201ENST00000385223 102 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 U8.14-201ENST00000390843 143 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 RPS3AP36-201ENST00000398190 775 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AL391361.1-201ENST00000405580 489 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AL139128.1-201ENST00000413921 941 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 NPM1P4-201ENST00000414095 812 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC083875.1-201ENST00000419509 405 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 NIPA2P1-201ENST00000426223 976 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 RPS24P8-201ENST00000431490 402 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 RPL37P21-201ENST00000435890 276 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 HMGB1P31-201ENST00000437242 427 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AL512326.1-201ENST00000443050 721 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 USP9YP12-201ENST00000450481 570 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC091564.1-201ENST00000464563 479 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 OR2AO1P-201ENST00000476497 403 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC013828.1-201ENST00000481845 158 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 RN7SL184P-201ENST00000488308 297 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC090638.1-201ENST00000498296 909 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC114981.1-201ENST00000503897 678 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms