Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 ADAM5-202ENST00000399789 1942 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VRK3Q8IV63 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VRK3Q8IV63 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 RNU1-106P-201ENST00000384382 164 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 RNU6-253P-201ENST00000384730 105 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 OR6C69P-201ENST00000394268 893 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 EI24P3-201ENST00000399046 1062 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 U3.32-201ENST00000408116 212 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 RN7SKP114-201ENST00000410327 279 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 RNU2-41P-201ENST00000410991 178 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 USP9YP6-201ENST00000413550 854 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 RPL23AP39-201ENST00000415533 405 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC009238.2-201ENST00000431026 355 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 MTND4LP16-201ENST00000440828 295 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 RPL7AP61-201ENST00000443410 636 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC112653.1-201ENST00000443851 386 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 USP9YP34-201ENST00000453983 808 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC110749.1-201ENST00000462007 357 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 MIR3691-201ENST00000578066 90 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AP005262.1-201ENST00000582646 997 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC112230.1-201ENST00000604342 547 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 IMMP1LP1-201ENST00000605170 488 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC012150.2-201ENST00000621300 544 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC012414.7-202ENST00000622705 1090 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 DUXAP9-208ENST00000622815 614 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC099494.2-201ENST00000623371 978 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC016717.3-201ENST00000624730 554 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VRK3Q8IV63 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VRK3Q8IV63 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VRK3Q8IV63 AC003985.2-201ENST00000562268 1669 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 SEC63P2-201ENST00000503863 1939 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 RNU6-543P-201ENST00000362576 108 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 U8.4-201ENST00000363626 134 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 Y_RNA.408-201ENST00000383987 102 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 MIR142-201ENST00000384835 87 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AL035079.1-201ENST00000405210 287 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 U3.36-201ENST00000408418 213 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 RNU6-575P-201ENST00000411326 105 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 DPPA2P3-201ENST00000411853 655 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC211486.3-201ENST00000412694 621 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 TPT1P2-201ENST00000413105 503 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 FO393419.3-201ENST00000428741 282 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC000111.3-201ENST00000433478 193 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 MTND5P20-201ENST00000448677 143 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 RFC5P1-201ENST00000454419 874 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 OR9M1P-201ENST00000459641 921 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC072039.1-201ENST00000477611 581 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC006499.3-201ENST00000506077 748 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 SCARNA21.2-201ENST00000516600 166 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms