Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MTCO1P4-201ENST00000520516 1409 ntBASIC4.34□□□□□ -1.71
LRRC38Q5VT99 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LRRC38Q5VT99 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC38Q5VT99 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.34□□□□□ -1.72
LRRC38Q5VT99 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
LRRC38Q5VT99 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.34□□□□□ -1.72
LRRC38Q5VT99 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC38Q5VT99 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC38Q5VT99 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC134882.1-201ENST00000603738 1676 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 KPNA2P2-201ENST00000419546 1489 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC100871.1-201ENST00000507871 1456 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC103591.2-201ENST00000265259 766 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 ENSAP3-201ENST00000312710 333 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 RNU1-132P-201ENST00000364300 164 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 SNORA3C-201ENST00000408792 125 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 BX664727.1-201ENST00000416024 466 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC004552.1-201ENST00000419089 348 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 NANOGP6-201ENST00000429190 847 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 MTCO1P54-201ENST00000430139 712 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 UBE2V1P6-201ENST00000430840 422 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 ACTR3P2-201ENST00000439585 1257 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 HMGB3P21-201ENST00000452483 547 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 snoU13.1-201ENST00000459157 104 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 RPS26P3-201ENST00000470205 348 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC090543.2-201ENST00000483963 348 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC004057.1-201ENST00000485827 348 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 RPL30P11-201ENST00000495304 339 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC139783.2-201ENST00000504847 1145 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC093720.1-201ENST00000505681 714 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC099522.1-202ENST00000514718 367 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC105233.3-201ENST00000531125 744 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AL356218.2-201ENST00000605264 187 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 MIR6730-201ENST00000622213 67 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 MIR4727-201ENST00000622232 55 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC016717.3-201ENST00000624730 554 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 AC132825.7-201ENST00000638744 335 ntBASIC4.33□□□□□ -1.72
LRRC38Q5VT99 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC38Q5VT99 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 OR4K17-201ENST00000315543 1032 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 RNA5SP513-201ENST00000364648 118 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 RN7SKP182-201ENST00000410772 298 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 RNA5SP306-201ENST00000411087 107 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 PGBD4P8-201ENST00000412993 562 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC073310.1-201ENST00000423226 1033 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 RPS7P5-201ENST00000441482 581 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 TPTE2P3-201ENST00000441562 1189 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC023050.1-201ENST00000498198 304 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC093824.1-201ENST00000508796 343 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 COX6B1P6-201ENST00000522347 255 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 MTND1P6-201ENST00000523621 946 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 MIR4512-201ENST00000583257 77 ntBASIC4.32□□□□□ -1.72
LRRC38Q5VT99 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC38Q5VT99 AC104662.1-201ENST00000604448 511 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms