Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC108941.1-201ENST00000502853 530 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 SNORA31.9-201ENST00000516429 84 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGN3Q15651 TGIF1P1-201ENST00000558095 802 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGN3Q15651 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 MIR4443-201ENST00000585052 53 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AC006254.3-201ENST00000603353 884 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AL445423.1-201ENST00000609941 536 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 MIR6867-201ENST00000610636 67 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 MLECP1-201ENST00000615893 709 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AF001550.2-201ENST00000636643 217 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGN3Q15651 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGN3Q15651 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGN3Q15651 ZNF826P-207ENST00000622273 1910 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HMGN3Q15651 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 AC069218.2-201ENST00000411665 344 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 RCC2P2-201ENST00000422174 918 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 HMGN2P7-201ENST00000456186 273 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 AC010618.1-201ENST00000469924 477 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 RPL7P19-201ENST00000469948 618 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGN3Q15651 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGN3Q15651 RNA5SP208-201ENST00000516156 78 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 AP001636.2-201ENST00000525517 696 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 MIR6716-201ENST00000613413 80 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGN3Q15651 U6.98-201ENST00000637157 84 ntBASIC3.16□□□□□ -1.9
HMGN3Q15651 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGN3Q15651 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGN3Q15651 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HMGN3Q15651 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGN3Q15651 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.15□□□□□ -1.9
HMGN3Q15651 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HMGN3Q15651 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGN3Q15651 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGN3Q15651 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGN3Q15651 NCSTNP1-201ENST00000406229 144 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RNU6-55P-201ENST00000411092 107 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RNU6-954P-201ENST00000411355 107 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGN3Q15651 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGN3Q15651 SNORA71B-202ENST00000439232 272 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGN3Q15651 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGN3Q15651 RPL10P17-201ENST00000453852 316 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AC006463.2-201ENST00000473326 348 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGN3Q15651 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGN3Q15651 RNA5SP164-201ENST00000516533 110 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RN7SKP289-201ENST00000517244 295 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGN3Q15651 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGN3Q15651 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.15□□□□□ -1.91
HMGN3Q15651 AC007448.1-201ENST00000582714 234 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGN3Q15651 AL591034.3-201ENST00000605511 685 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AL354760.1-201ENST00000608357 643 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGN3Q15651 AC079684.1-201ENST00000621405 437 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 MIR6500-201ENST00000622700 86 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AC010435.1-201ENST00000623353 1177 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 AC112484.5-201ENST00000624189 228 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HMGN3Q15651 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGN3Q15651 MFSD8-236ENST00000641509 4050 ntBASIC3.15□□□□□ -1.91
HMGN3Q15651 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGN3Q15651 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HMGN3Q15651 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN3Q15651 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGN3Q15651 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGN3Q15651 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 MTCO1P14-201ENST00000441695 1559 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AC092326.2-201ENST00000624772 1561 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms