Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HMGB1P20-201ENST00000402555 677 ntBASIC5.55□□□□□ -1.52
YBX1P67809 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
YBX1P67809 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 ZNF90P2-204ENST00000419323 1075 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 CRIP1P1-201ENST00000427567 185 ntBASIC5.55□□□□□ -1.52
YBX1P67809 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 MTND6P12-201ENST00000428247 522 ntBASIC5.55□□□□□ -1.52
YBX1P67809 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 FCF1P1-201ENST00000432690 571 ntBASIC5.55□□□□□ -1.52
YBX1P67809 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 MED28P3-201ENST00000444288 531 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC022364.2-201ENST00000457963 554 ntBASIC5.55□□□□□ -1.52
YBX1P67809 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 AC007998.1-201ENST00000474156 672 ntBASIC5.55□□□□□ -1.52
YBX1P67809 RPS29P25-201ENST00000481709 171 ntBASIC5.55□□□□□ -1.52
YBX1P67809 DUTP1-201ENST00000493631 470 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.55□□□□□ -1.52
YBX1P67809 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 AC008638.1-201ENST00000506035 866 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.55□□□□□ -1.52
YBX1P67809 AC026412.2-201ENST00000512270 1075 ntBASIC5.55□□□□□ -1.52
YBX1P67809 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.55□□□□□ -1.52
YBX1P67809 MTND5P4-201ENST00000514978 288 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.55□□□□□ -1.52
YBX1P67809 AC022878.1-201ENST00000530684 149 ntBASIC5.55□□□□□ -1.52
YBX1P67809 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 HSPE1P2-201ENST00000554777 306 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.55□□□□□ -1.52
YBX1P67809 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.55□□□□□ -1.52
YBX1P67809 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.55□□□□□ -1.52
YBX1P67809 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 NRBF2P5-201ENST00000603087 788 ntBASIC5.55□□□□□ -1.52
YBX1P67809 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.55□□□□□ -1.52
YBX1P67809 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 AC110994.2-201ENST00000635481 492 ntBASIC5.55□□□□□ -1.52
YBX1P67809 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 AC006206.1-201ENST00000544842 3387 ntBASIC5.55□□□□□ -1.52
YBX1P67809 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.55□□□□□ -1.52
YBX1P67809 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 RLIMP2-201ENST00000427891 1563 ntBASIC5.55□□□□□ -1.52
YBX1P67809 AC079097.1-201ENST00000512187 1399 ntBASIC5.55□□□□□ -1.52
YBX1P67809 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
YBX1P67809 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
YBX1P67809 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
YBX1P67809 RNU6-1085P-201ENST00000363576 107 ntBASIC5.54□□□□□ -1.52
YBX1P67809 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 MIR1303-201ENST00000408625 86 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.54□□□□□ -1.52
YBX1P67809 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 NPM1P22-201ENST00000427761 952 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.54□□□□□ -1.52
YBX1P67809 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 RPL36AP39-201ENST00000445859 318 ntBASIC5.54□□□□□ -1.52
YBX1P67809 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 NIPA2P5-201ENST00000452282 464 ntBASIC5.54□□□□□ -1.52
YBX1P67809 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 RPL38P1-201ENST00000460914 211 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC091564.1-201ENST00000464563 479 ntBASIC5.54□□□□□ -1.52
YBX1P67809 RPS17P15-201ENST00000475609 349 ntBASIC5.54□□□□□ -1.52
YBX1P67809 ACTR3P3-201ENST00000480448 893 ntBASIC5.54□□□□□ -1.52
YBX1P67809 PPP1R11P1-201ENST00000486095 376 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC073610.1-201ENST00000489971 396 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC012170.1-201ENST00000495139 359 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 AC105384.2-201ENST00000508433 640 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 AC010493.1-201ENST00000513479 292 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 SNORA70.20-201ENST00000516848 126 ntBASIC5.54□□□□□ -1.52
YBX1P67809 RNA5SP135-201ENST00000517019 125 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms