Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.31□□□□□ -1.72
CLDN20P56880 RPS5P7-201ENST00000456664 608 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC104971.1-201ENST00000495117 578 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 MTCYBP35-201ENST00000503630 1137 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 SCARNA22-201ENST00000503991 125 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 AC091868.1-201ENST00000508746 304 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN20P56880 DUXAP5-201ENST00000529668 529 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 AC023538.1-201ENST00000534576 736 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN20P56880 MIR5699-201ENST00000578903 90 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 MIR4270-201ENST00000581799 70 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 AP001269.3-201ENST00000588718 329 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 NIFKP6-201ENST00000598115 845 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC123786.2-201ENST00000603459 275 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 AL158163.2-201ENST00000619110 700 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 EOGT-210ENST00000615922 1931 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 AC010928.1-201ENST00000592477 1447 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 AC134882.1-201ENST00000603738 1676 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL512646.1-201ENST00000269395 1077 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 RNU6-707P-201ENST00000364647 95 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLDN20P56880 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 RNU1-82P-201ENST00000390851 165 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC093719.1-202ENST00000392735 373 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 CYB5AP4-201ENST00000396692 399 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC119751.3-201ENST00000399720 670 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 ERHP2-201ENST00000402323 299 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 RNU2-65P-201ENST00000410162 185 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 RNU2-50P-201ENST00000410494 143 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC099336.2-201ENST00000422457 254 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 NPM1P24-201ENST00000428039 894 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 MTCO1P3-201ENST00000429327 192 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 MOB1AP1-201ENST00000430903 535 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL451139.1-201ENST00000434718 346 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 TDGF1P1-201ENST00000445734 527 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC007327.1-201ENST00000447461 264 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC099560.2-201ENST00000457554 255 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 RPS23P1-201ENST00000491662 432 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC113430.1-201ENST00000506872 718 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 MRPS36P3-201ENST00000519284 130 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN20P56880 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC092747.2-201ENST00000545069 983 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC090888.2-201ENST00000559765 1144 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN20P56880 MIR3912-201ENST00000577566 105 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 MIR4700-201ENST00000578311 74 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC069366.1-201ENST00000583159 838 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC061975.8-201ENST00000587058 721 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 SLC25A36P1-201ENST00000590111 465 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 AC007349.4-201ENST00000608114 532 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL161616.1-201ENST00000611867 286 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AC024257.5-201ENST00000612739 531 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 MIR6853-201ENST00000619642 74 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL157770.1-201ENST00000623049 439 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms