Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VCPP55072 AC140479.6-201ENST00000633535 357 ntBASIC4.56□□□□□ -1.68
VCPP55072 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VCPP55072 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VCPP55072 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
VCPP55072 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VCPP55072 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VCPP55072 RNA5SP124-201ENST00000362739 110 ntBASIC4.55□□□□□ -1.68
VCPP55072 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.55□□□□□ -1.68
VCPP55072 MIR1911-201ENST00000410783 80 ntBASIC4.55□□□□□ -1.68
VCPP55072 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.55□□□□□ -1.68
VCPP55072 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.55□□□□□ -1.68
VCPP55072 NPM1P24-201ENST00000428039 894 ntBASIC4.55□□□□□ -1.68
VCPP55072 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.55□□□□□ -1.68
VCPP55072 PRELID3BP10-201ENST00000431957 584 ntBASIC4.55□□□□□ -1.68
VCPP55072 AC069285.2-201ENST00000440210 275 ntBASIC4.55□□□□□ -1.68
VCPP55072 Z99127.2-201ENST00000441426 334 ntBASIC4.55□□□□□ -1.68
VCPP55072 ABCF2P2-201ENST00000450549 296 ntBASIC4.55□□□□□ -1.68
VCPP55072 HMGB3P21-201ENST00000452483 547 ntBASIC4.55□□□□□ -1.68
VCPP55072 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.55□□□□□ -1.68
VCPP55072 AC025181.1-201ENST00000477507 416 ntBASIC4.55□□□□□ -1.68
VCPP55072 SNORD116-26-201ENST00000516006 96 ntBASIC4.55□□□□□ -1.68
VCPP55072 TRMT10BP1-201ENST00000519377 943 ntBASIC4.55□□□□□ -1.68
VCPP55072 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.55□□□□□ -1.68
VCPP55072 AP000619.3-201ENST00000535634 1127 ntBASIC4.55□□□□□ -1.68
VCPP55072 SNRPGP1-201ENST00000553864 222 ntBASIC4.55□□□□□ -1.68
VCPP55072 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 AC015802.5-201ENST00000607478 399 ntBASIC4.55□□□□□ -1.68
VCPP55072 LINC00216-201ENST00000623548 1126 ntBASIC4.55□□□□□ -1.68
VCPP55072 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VCPP55072 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VCPP55072 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.54□□□□□ -1.68
VCPP55072 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.54□□□□□ -1.68
VCPP55072 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VCPP55072 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VCPP55072 RPL23AP48-201ENST00000406913 488 ntBASIC4.54□□□□□ -1.68
VCPP55072 TRGV6-201ENST00000417928 299 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.54□□□□□ -1.68
VCPP55072 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.54□□□□□ -1.68
VCPP55072 AL035246.1-201ENST00000433554 1255 ntBASIC4.54□□□□□ -1.68
VCPP55072 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.54□□□□□ -1.68
VCPP55072 AC114495.1-201ENST00000441274 436 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.54□□□□□ -1.68
VCPP55072 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
VCPP55072 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.54□□□□□ -1.68
VCPP55072 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.54□□□□□ -1.68
VCPP55072 AC010460.1-201ENST00000507087 466 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC008958.1-201ENST00000511047 682 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC034244.2-201ENST00000514668 858 ntBASIC4.54□□□□□ -1.68
VCPP55072 RN7SKP157-201ENST00000516174 282 ntBASIC4.54□□□□□ -1.68
VCPP55072 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.54□□□□□ -1.68
VCPP55072 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.54□□□□□ -1.68
VCPP55072 TVP23BP1-201ENST00000557500 617 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.54□□□□□ -1.68
VCPP55072 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.54□□□□□ -1.68
VCPP55072 AC112230.1-201ENST00000604342 547 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.54□□□□□ -1.68
VCPP55072 AC005021.1-201ENST00000608730 355 ntBASIC4.54□□□□□ -1.68
VCPP55072 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VCPP55072 AC104307.1-201ENST00000616142 196 ntBASIC4.54□□□□□ -1.68
VCPP55072 AL357559.1-201ENST00000622228 274 ntBASIC4.54□□□□□ -1.68
VCPP55072 AC019080.5-201ENST00000624891 757 ntBASIC4.54□□□□□ -1.68
VCPP55072 CFTRP2-201ENST00000634304 199 ntBASIC4.54□□□□□ -1.68
VCPP55072 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
VCPP55072 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.54□□□□□ -1.68
VCPP55072 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VCPP55072 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 RLIMP1-201ENST00000339626 1680 ntBASIC4.54□□□□□ -1.68
VCPP55072 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VCPP55072 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.53□□□□□ -1.68
VCPP55072 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VCPP55072 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VCPP55072 SNORA73.2-201ENST00000364946 201 ntBASIC4.53□□□□□ -1.68
VCPP55072 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 AC097374.1-203ENST00000400783 485 ntBASIC4.53□□□□□ -1.68
VCPP55072 AL603766.1-201ENST00000407763 664 ntBASIC4.53□□□□□ -1.68
VCPP55072 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.53□□□□□ -1.68
VCPP55072 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.53□□□□□ -1.68
VCPP55072 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
VCPP55072 BTF3P9-201ENST00000418784 283 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.53□□□□□ -1.68
VCPP55072 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 AC009965.2-201ENST00000425328 970 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms