Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC037198.2-201ENST00000478845 733 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC078817.1-201ENST00000492623 435 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.73□□□□□ -1.81
GTF2A1P52655 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 IGLV2-28-201ENST00000520681 304 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.73□□□□□ -1.81
GTF2A1P52655 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.73□□□□□ -1.81
GTF2A1P52655 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
GTF2A1P52655 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.73□□□□□ -1.81
GTF2A1P52655 AC005951.1-201ENST00000576706 485 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC010857.1-201ENST00000606398 594 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC004832.5-201ENST00000608677 401 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC100847.1-201ENST00000611316 481 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC004241.3-201ENST00000611728 517 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AL512624.1-201ENST00000613638 469 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.73□□□□□ -1.81
GTF2A1P52655 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.73□□□□□ -1.81
GTF2A1P52655 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
GTF2A1P52655 AC110774.1-201ENST00000623567 2018 ntBASIC3.73□□□□□ -1.81
GTF2A1P52655 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
GTF2A1P52655 RNA5SP295-201ENST00000362655 121 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 RNA5SP383-201ENST00000362934 120 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 AL136131.1-201ENST00000406079 803 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 HMGB3P23-201ENST00000414981 585 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.72□□□□□ -1.81
GTF2A1P52655 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.72□□□□□ -1.81
GTF2A1P52655 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.72□□□□□ -1.81
GTF2A1P52655 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.72□□□□□ -1.81
GTF2A1P52655 MTND6P32-201ENST00000457611 483 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 RPS3AP41-201ENST00000462701 778 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 AC004453.1-201ENST00000487895 408 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
GTF2A1P52655 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.72□□□□□ -1.81
GTF2A1P52655 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.72□□□□□ -1.81
GTF2A1P52655 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
GTF2A1P52655 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.72□□□□□ -1.81
GTF2A1P52655 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.72□□□□□ -1.81
GTF2A1P52655 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.72□□□□□ -1.81
GTF2A1P52655 AP001180.3-201ENST00000582221 145 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 AC069061.3-201ENST00000582254 823 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 AC016957.2-201ENST00000616998 848 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.72□□□□□ -1.81
GTF2A1P52655 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.72□□□□□ -1.81
GTF2A1P52655 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
GTF2A1P52655 AC006971.1-201ENST00000407916 4486 ntBASIC3.72□□□□□ -1.81
GTF2A1P52655 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.71□□□□□ -1.82
GTF2A1P52655 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
GTF2A1P52655 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF2A1P52655 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GTF2A1P52655 SNORA51.1-201ENST00000363243 140 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 SNORD113.2-201ENST00000364166 89 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 RNA5SP87-201ENST00000384155 118 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 TMSB10P2-201ENST00000416049 131 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 UQCRBP1-201ENST00000421129 336 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 CHIAP3-201ENST00000423668 1133 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 RPL7P46-201ENST00000425129 740 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 FAR1P1-201ENST00000427163 934 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC104837.2-201ENST00000427236 424 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 SERPINA7P1-201ENST00000443077 631 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.71□□□□□ -1.82
GTF2A1P52655 NPM1P17-201ENST00000479221 602 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC005726.1-201ENST00000494679 427 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC020893.1-201ENST00000502452 580 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GTF2A1P52655 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.71□□□□□ -1.82
GTF2A1P52655 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 FABP5P12-201ENST00000515543 389 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.71□□□□□ -1.82
GTF2A1P52655 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.71□□□□□ -1.82
GTF2A1P52655 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.71□□□□□ -1.82
GTF2A1P52655 AL606490.9-201ENST00000603331 271 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC091488.1-201ENST00000604239 660 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC019193.2-201ENST00000610012 634 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC016769.4-201ENST00000616893 535 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 AC090510.2-201ENST00000617465 629 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF2A1P52655 MIR6886-201ENST00000619864 61 ntBASIC3.71□□□□□ -1.82
GTF2A1P52655 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.71□□□□□ -1.82
GTF2A1P52655 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.71□□□□□ -1.82
GTF2A1P52655 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.71□□□□□ -1.82
GTF2A1P52655 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
GTF2A1P52655 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.71□□□□□ -1.82
GTF2A1P52655 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.7□□□□□ -1.82
GTF2A1P52655 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GTF2A1P52655 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
GTF2A1P52655 SNORA70F-201ENST00000384142 135 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 SNORA11.5-201ENST00000408163 128 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 MIR1178-201ENST00000408396 91 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 MIR1251-201ENST00000408552 70 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 MTND2P16-201ENST00000419987 799 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 NFYAP1-201ENST00000431953 972 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 AL132765.1-201ENST00000434165 553 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.7□□□□□ -1.82
GTF2A1P52655 NPM1P48-201ENST00000436002 853 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 HSPE1P28-201ENST00000443139 211 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 RPS3AP46-201ENST00000448352 682 ntBASIC3.7□□□□□ -1.82
GTF2A1P52655 AC010326.1-201ENST00000462726 602 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms