Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MIR4330-201ENST00000579077 105 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 AC010615.3-201ENST00000597319 394 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC012409.3-201ENST00000611343 981 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 FAM27D1-201ENST00000612308 341 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.29□□□□□ -1.72
CASQ1P31415 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC124312.6-202ENST00000623624 418 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CASQ1P31415 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.28□□□□□ -1.72
CASQ1P31415 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CASQ1P31415 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 RPL23AP27-201ENST00000415161 451 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.28□□□□□ -1.72
CASQ1P31415 AC011998.1-201ENST00000433403 117 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC023347.2-201ENST00000433994 462 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.28□□□□□ -1.72
CASQ1P31415 PHBP16-201ENST00000446318 950 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.28□□□□□ -1.72
CASQ1P31415 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 RN7SL329P-201ENST00000467740 299 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 RN7SL330P-201ENST00000469709 307 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 AC093763.2-201ENST00000505334 1223 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 OR7H2P-201ENST00000513483 306 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.28□□□□□ -1.72
CASQ1P31415 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.28□□□□□ -1.72
CASQ1P31415 AC105233.3-201ENST00000531125 744 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC092747.2-201ENST00000545069 983 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 AC012146.2-201ENST00000576545 416 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 MIR3934-201ENST00000579806 107 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 RN7SL690P-201ENST00000582087 240 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC010928.3-201ENST00000587712 541 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.28□□□□□ -1.72
CASQ1P31415 AC006254.3-201ENST00000603353 884 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC069304.3-201ENST00000603938 1084 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC005084.1-201ENST00000605160 304 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC090525.3-201ENST00000605601 189 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.28□□□□□ -1.72
CASQ1P31415 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 AL157700.1-201ENST00000561973 1432 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASQ1P31415 MTND5P3-201ENST00000438536 1800 ntBASIC4.28□□□□□ -1.72
CASQ1P31415 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.28□□□□□ -1.73
CASQ1P31415 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.73
CASQ1P31415 RIOK3P1-201ENST00000418778 1528 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CASQ1P31415 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CASQ1P31415 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 RNU6-244P-201ENST00000391028 104 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 HLFP1-201ENST00000402375 499 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC083863.1-201ENST00000438811 231 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 RNU4-60P-201ENST00000517239 135 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 IGKV1-32-201ENST00000519290 311 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CASQ1P31415 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.27□□□□□ -1.73
CASQ1P31415 CENPUP2-201ENST00000555897 1186 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC025627.2-201ENST00000576220 160 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.27□□□□□ -1.73
CASQ1P31415 AC022146.1-201ENST00000595307 847 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms