Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL359643.1-201ENST00000404109 423 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC073310.1-201ENST00000423226 1033 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 HSFY3P-201ENST00000444242 1191 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA13P31271 AC008280.2-201ENST00000455473 307 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AC018635.1-201ENST00000468292 1030 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 RPS4XP6-201ENST00000477670 797 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 RPS29P19-201ENST00000479709 171 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AC104164.2-201ENST00000496953 495 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA13P31271 AC119751.4-201ENST00000507498 357 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AC008565.1-201ENST00000509046 885 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 RFPL4AP5-201ENST00000514977 504 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 HMGB1P23-201ENST00000518743 568 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA13P31271 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC084824.1-201ENST00000550917 1005 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA13P31271 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA13P31271 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXA13P31271 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXA13P31271 AC011492.1-201ENST00000600023 315 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AC123786.2-201ENST00000603459 275 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 MIR6867-201ENST00000610636 67 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 SNX18P1Y-201ENST00000616231 511 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 AL138721.1-201ENST00000616756 179 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 STMN1P1-201ENST00000617809 440 ntBASIC4.83□□□□□ -1.64
HOXA13P31271 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA13P31271 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA13P31271 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA13P31271 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA13P31271 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA13P31271 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA13P31271 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA13P31271 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA13P31271 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA13P31271 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA13P31271 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA13P31271 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 BTBD10P1-201ENST00000549824 1352 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 AC104260.2-201ENST00000623551 3497 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 ENSAP3-201ENST00000312710 333 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXA13P31271 MIR372-201ENST00000362225 67 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 RNU5B-4P-201ENST00000363508 111 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 SNORA68.2-201ENST00000391263 128 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 ATP5F1P2-201ENST00000398143 760 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 DNAJC19P6-201ENST00000401853 280 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 RN7SKP33-201ENST00000410942 340 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC096533.1-201ENST00000411645 353 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 OR8G2P-201ENST00000412796 908 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA13P31271 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 SUMO2P5-201ENST00000506790 245 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXA13P31271 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 IGKV2-36-201ENST00000519999 223 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 AC083923.1-201ENST00000523708 376 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC105233.3-201ENST00000531125 744 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA13P31271 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA13P31271 FRG1HP-204ENST00000617940 757 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC022079.2-201ENST00000619739 566 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC007275.1-201ENST00000621243 671 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC019278.1-201ENST00000623516 479 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC004808.1-201ENST00000627671 721 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 AC099654.8-201ENST00000637757 681 ntBASIC4.82□□□□□ -1.64
HOXA13P31271 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA13P31271 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms