Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC099563.1-201ENST00000456086 418 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AP000942.1-201ENST00000463969 747 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC008155.2-201ENST00000464337 397 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGA1P17096 SYT14P1-201ENST00000481459 721 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HMGA1P17096 RN7SKP209-201ENST00000516888 304 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGA1P17096 TRAV15-201ENST00000556680 249 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC027281.1-201ENST00000574178 758 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.76□□□□□ -1.81
HMGA1P17096 AC008638.3-201ENST00000603341 463 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 BRDTP1-201ENST00000605735 677 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC096577.2-201ENST00000611455 153 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGA1P17096 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGA1P17096 AC087190.4-201ENST00000574616 8334 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGA1P17096 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGA1P17096 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HMGA1P17096 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HMGA1P17096 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HMGA1P17096 NEAT1-202ENST00000501122 22743 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 SAGE2P-201ENST00000420011 2126 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGA1P17096 RPL21P110-201ENST00000433345 446 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 EIF4A1P11-201ENST00000451239 222 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 RPL5P30-201ENST00000465511 891 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AC069499.1-201ENST00000489433 509 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 FTH1P24-201ENST00000503502 462 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AC004069.2-201ENST00000505438 1114 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AC109458.1-201ENST00000508858 316 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGA1P17096 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGA1P17096 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 AL161756.2-201ENST00000604597 246 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 AC006077.1-201ENST00000604746 343 ntBASIC3.75□□□□□ -1.81
HMGA1P17096 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGA1P17096 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HMGA1P17096 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HMGA1P17096 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGA1P17096 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HMGA1P17096 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGA1P17096 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGA1P17096 OR6K3-202ENST00000368146 996 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AC234772.1-201ENST00000377927 937 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGA1P17096 AL391219.1-201ENST00000422570 483 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AL356535.1-201ENST00000440335 398 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AC092809.1-201ENST00000441469 474 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 RPS15AP29-201ENST00000445539 400 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 YWHAQP9-201ENST00000445891 512 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 U3.44-201ENST00000458938 192 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGA1P17096 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
HMGA1P17096 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGA1P17096 HSPD1P15-201ENST00000505573 1122 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGA1P17096 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGA1P17096 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGA1P17096 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGA1P17096 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGA1P17096 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AL390334.1-201ENST00000556395 450 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
HMGA1P17096 AL159169.3-201ENST00000608871 561 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 AC243654.2-201ENST00000612843 443 ntBASIC3.74□□□□□ -1.81
HMGA1P17096 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGA1P17096 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGA1P17096 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HMGA1P17096 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGA1P17096 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGA1P17096 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGA1P17096 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGA1P17096 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGA1P17096 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGA1P17096 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGA1P17096 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms