Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SERPINE4P-201ENST00000554978 281 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 CYCSP38-201ENST00000559840 322 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC002310.3-201ENST00000569728 723 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL6A2P12110 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC011451.2-201ENST00000604303 598 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC004067.1-201ENST00000608733 700 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 BX323046.1-201ENST00000610145 535 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC008115.3-201ENST00000614874 549 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 AL139089.1-201ENST00000620372 975 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL6A2P12110 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 AC093591.2-201ENST00000565254 3843 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 SNRPEP3-201ENST00000338402 276 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL6A2P12110 RNA5SP273-201ENST00000362484 113 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 Y_RNA.97-201ENST00000363094 102 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.5□□□□□ -1.53
COL6A2P12110 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 Y_RNA.554-201ENST00000384672 102 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 SNORA40.3-201ENST00000390964 122 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC092642.1-201ENST00000392417 425 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC025750.1-201ENST00000399891 379 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 MIR1203-201ENST00000408812 85 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC109780.2-201ENST00000413467 845 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 HMGB3P23-201ENST00000414981 585 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AIMP1P1-201ENST00000418670 937 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AL035660.1-201ENST00000422041 222 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 ZYG11AP1-201ENST00000430329 837 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC110602.1-201ENST00000437414 318 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AP000936.3-201ENST00000438127 255 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC002504.1-201ENST00000438281 691 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AL591623.2-201ENST00000449978 222 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.5□□□□□ -1.53
COL6A2P12110 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 RPS3AP17-201ENST00000472594 777 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC021678.1-201ENST00000505195 936 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC098976.1-201ENST00000513014 541 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 RNU6-528P-201ENST00000516926 100 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC124947.2-202ENST00000552735 133 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC026826.3-201ENST00000561747 158 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC006960.3-201ENST00000561845 705 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.5□□□□□ -1.53
COL6A2P12110 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.5□□□□□ -1.53
COL6A2P12110 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC090578.1-201ENST00000604955 591 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 IMMP1LP1-201ENST00000605170 488 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AP001521.1-201ENST00000609150 300 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC069234.5-201ENST00000611056 416 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC007014.2-201ENST00000615581 479 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 AC108479.2-201ENST00000617314 601 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 CR381653.2-201ENST00000624041 768 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 CRYM-AS1-204ENST00000637983 556 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL6A2P12110 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
COL6A2P12110 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
COL6A2P12110 AC100757.1-201ENST00000616872 1835 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL6A2P12110 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 AC133552.1-201ENST00000569988 4007 ntBASIC5.5□□□□□ -1.53
COL6A2P12110 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL6A2P12110 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 DCAF13P1-201ENST00000495256 1330 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.49□□□□□ -1.53
COL6A2P12110 ELF2P3-201ENST00000445099 1506 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms