Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 uc_338.9-201ENST00000617424 182 ntBASIC4.68□□□□□ -1.66
TOP1P11387 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.68□□□□□ -1.66
TOP1P11387 CFTRP2-201ENST00000634304 199 ntBASIC4.68□□□□□ -1.66
TOP1P11387 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.68□□□□□ -1.66
TOP1P11387 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.68□□□□□ -1.66
TOP1P11387 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
TOP1P11387 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TOP1P11387 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TOP1P11387 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOP1P11387 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOP1P11387 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.68□□□□□ -1.66
TOP1P11387 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TOP1P11387 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 RNU1-64P-201ENST00000365443 163 ntBASIC4.67□□□□□ -1.66
TOP1P11387 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.67□□□□□ -1.66
TOP1P11387 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.67□□□□□ -1.66
TOP1P11387 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.67□□□□□ -1.66
TOP1P11387 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 YPEL5P3-201ENST00000547227 352 ntBASIC4.67□□□□□ -1.66
TOP1P11387 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.67□□□□□ -1.66
TOP1P11387 AP001542.1-201ENST00000591314 200 ntBASIC4.67□□□□□ -1.66
TOP1P11387 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 VN1R84P-201ENST00000593697 235 ntBASIC4.67□□□□□ -1.66
TOP1P11387 AC068790.5-201ENST00000602741 355 ntBASIC4.67□□□□□ -1.66
TOP1P11387 AL592436.1-201ENST00000605135 558 ntBASIC4.67□□□□□ -1.66
TOP1P11387 AL109618.2-201ENST00000605527 211 ntBASIC4.67□□□□□ -1.66
TOP1P11387 AC138473.1-201ENST00000605717 526 ntBASIC4.67□□□□□ -1.66
TOP1P11387 OR6R2P-201ENST00000609216 300 ntBASIC4.67□□□□□ -1.66
TOP1P11387 AC139769.3-201ENST00000618383 175 ntBASIC4.67□□□□□ -1.66
TOP1P11387 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
TOP1P11387 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP1P11387 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TOP1P11387 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.66□□□□□ -1.66
TOP1P11387 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP1P11387 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP1P11387 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TOP1P11387 RNA5SP399-201ENST00000364003 117 ntBASIC4.66□□□□□ -1.66
TOP1P11387 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP1P11387 RNU6-213P-201ENST00000384051 104 ntBASIC4.66□□□□□ -1.66
TOP1P11387 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP1P11387 SNORA3C-201ENST00000408792 125 ntBASIC4.66□□□□□ -1.66
TOP1P11387 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.66□□□□□ -1.66
TOP1P11387 AL121578.1-201ENST00000428051 892 ntBASIC4.66□□□□□ -1.66
TOP1P11387 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP1P11387 KCTD10P1-201ENST00000434203 625 ntBASIC4.66□□□□□ -1.66
TOP1P11387 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.66□□□□□ -1.66
TOP1P11387 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.66□□□□□ -1.66
TOP1P11387 HMGB3P22-202ENST00000451823 572 ntBASIC4.66□□□□□ -1.66
TOP1P11387 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP1P11387 HMGN1P8-201ENST00000463578 288 ntBASIC4.66□□□□□ -1.66
TOP1P11387 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP1P11387 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.66□□□□□ -1.66
TOP1P11387 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP1P11387 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP1P11387 RNA5SP179-201ENST00000517284 121 ntBASIC4.66□□□□□ -1.66
TOP1P11387 IGKV2-38-201ENST00000517443 247 ntBASIC4.66□□□□□ -1.66
TOP1P11387 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP1P11387 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.66□□□□□ -1.66
TOP1P11387 AL049874.4-201ENST00000557593 255 ntBASIC4.66□□□□□ -1.66
TOP1P11387 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.66□□□□□ -1.66
TOP1P11387 AC091167.4-201ENST00000605079 184 ntBASIC4.66□□□□□ -1.66
TOP1P11387 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP1P11387 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP1P11387 AC096656.1-201ENST00000623826 1364 ntBASIC4.65□□□□□ -1.66
TOP1P11387 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TOP1P11387 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TOP1P11387 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.65□□□□□ -1.66
TOP1P11387 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TOP1P11387 AL139811.1-201ENST00000424779 2299 ntBASIC4.65□□□□□ -1.66
TOP1P11387 AL445189.1-201ENST00000405722 338 ntBASIC4.65□□□□□ -1.67
TOP1P11387 MIR1251-201ENST00000408552 70 ntBASIC4.65□□□□□ -1.67
TOP1P11387 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.65□□□□□ -1.67
TOP1P11387 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.65□□□□□ -1.67
TOP1P11387 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.65□□□□□ -1.67
TOP1P11387 TPTE2P3-201ENST00000441562 1189 ntBASIC4.65□□□□□ -1.67
TOP1P11387 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.65□□□□□ -1.67
TOP1P11387 RNU7-27P-201ENST00000459281 62 ntBASIC4.65□□□□□ -1.67
TOP1P11387 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.65□□□□□ -1.67
TOP1P11387 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.65□□□□□ -1.67
TOP1P11387 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.65□□□□□ -1.67
TOP1P11387 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TOP1P11387 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms