Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NIPA2P5-201ENST00000452282 464 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AL035090.1-201ENST00000454835 332 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RPL30P9-201ENST00000465586 330 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RPL5P12-201ENST00000477071 851 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC090013.1-201ENST00000485147 480 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 HMGN2P25-201ENST00000486956 268 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SL447P-201ENST00000494711 245 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC108078.3-201ENST00000502633 489 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 SNX5P1-201ENST00000505757 1041 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 HMGB1P28-201ENST00000507778 552 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC114786.4-201ENST00000508771 728 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 PTGES3P3-201ENST00000511479 482 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SKP66-201ENST00000516681 231 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 HIGD1AP5-201ENST00000529959 259 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 SLC2A13P1-201ENST00000531560 322 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC090424.1-201ENST00000535243 736 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC093519.1-201ENST00000566109 298 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 MIR4646-201ENST00000580775 63 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 VN1R79P-201ENST00000593540 513 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 VN1R84P-201ENST00000593697 235 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 BNIP3P11-201ENST00000603878 563 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 MIR1302-2-201ENST00000607096 138 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 OR5BR1P-201ENST00000524992 1330 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC011493.1-201ENST00000596753 1632 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 PWAR1-201ENST00000624188 2414 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.25-201ENST00000362528 102 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RNU6-1090P-201ENST00000364065 94 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SKP6-201ENST00000364795 319 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RNU6-1227P-201ENST00000383981 107 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.529-201ENST00000384586 119 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 MIR551A-201ENST00000385042 96 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RNU6-332P-201ENST00000391193 108 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AL354751.2-201ENST00000415471 210 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RBMY2KP-201ENST00000418221 992 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RPS17P17-201ENST00000419392 409 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ELOCP14-201ENST00000428070 331 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 UBE2FP3-201ENST00000436366 524 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ELOCP7-201ENST00000439968 331 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 MTCYBP43-201ENST00000513621 740 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.675-201ENST00000516389 149 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 OR5AQ1P-201ENST00000527596 927 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AL352979.3-201ENST00000553515 247 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC060780.3-201ENST00000589464 80 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AL049539.1-201ENST00000611964 459 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC100827.5-201ENST00000615883 426 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC018816.2-201ENST00000621460 353 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AP001784.1-201ENST00000624107 428 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 AC079228.1-201ENST00000624774 1049 ntBASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CSB-PGBD3P0DP91 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 MTCO1P23-201ENST00000415223 1526 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC005034.3-201ENST00000604845 1747 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms