Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 KRR1P1-201ENST00000419430 803 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.35□□□□□ -1.87
FREM3P0C091 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AL157884.3-201ENST00000448273 1184 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 PPIAP3-201ENST00000450588 505 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 RPS6P2-201ENST00000454208 705 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC104619.4-201ENST00000510773 249 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 RAC1P2-201ENST00000511164 579 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 AC092747.2-201ENST00000545069 983 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 AL355365.1-201ENST00000616480 294 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 RMST_9.1-201ENST00000619945 193 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 AC004777.1-201ENST00000624317 287 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.34□□□□□ -1.87
FREM3P0C091 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.34□□□□□ -1.87
FREM3P0C091 RPL7P60-201ENST00000397636 735 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FREM3P0C091 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.34□□□□□ -1.87
FREM3P0C091 HSPD1P21-201ENST00000436541 245 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.34□□□□□ -1.87
FREM3P0C091 AC113430.1-201ENST00000506872 718 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 SOD1P3-201ENST00000518682 454 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.34□□□□□ -1.87
FREM3P0C091 AP000619.3-201ENST00000535634 1127 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.34□□□□□ -1.87
FREM3P0C091 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.34□□□□□ -1.87
FREM3P0C091 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.34□□□□□ -1.87
FREM3P0C091 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.34□□□□□ -1.87
FREM3P0C091 AL451049.1-201ENST00000608672 497 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 AC244205.2-202ENST00000635781 342 ntBASIC3.34□□□□□ -1.87
FREM3P0C091 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
FREM3P0C091 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.34□□□□□ -1.87
FREM3P0C091 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
FREM3P0C091 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.34□□□□□ -1.87
FREM3P0C091 SNORA63.1-201ENST00000362493 131 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 GCNT6-201ENST00000379591 934 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 MIR449B-201ENST00000384995 97 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 AC245052.5-201ENST00000416320 649 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 AC074367.1-201ENST00000438685 1125 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 MTND2P25-201ENST00000449028 610 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.34□□□□□ -1.88
FREM3P0C091 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.34□□□□□ -1.88
FREM3P0C091 HSPD1P15-201ENST00000505573 1122 ntBASIC3.34□□□□□ -1.88
FREM3P0C091 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.34□□□□□ -1.88
FREM3P0C091 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.34□□□□□ -1.88
FREM3P0C091 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.34□□□□□ -1.88
FREM3P0C091 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.34□□□□□ -1.88
FREM3P0C091 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.34□□□□□ -1.88
FREM3P0C091 MTCO1P46-201ENST00000451639 1491 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FREM3P0C091 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
FREM3P0C091 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
FREM3P0C091 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
FREM3P0C091 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 NR1H5P-201ENST00000452683 1377 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FREM3P0C091 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FREM3P0C091 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FREM3P0C091 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.33□□□□□ -1.88
FREM3P0C091 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FREM3P0C091 SNORD3H-201ENST00000384486 214 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.33□□□□□ -1.88
FREM3P0C091 SNORA79B-201ENST00000410557 148 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 RN7SKP159-201ENST00000410657 292 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.33□□□□□ -1.88
FREM3P0C091 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.33□□□□□ -1.88
FREM3P0C091 AL159987.2-201ENST00000432754 307 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.33□□□□□ -1.88
FREM3P0C091 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.33□□□□□ -1.88
FREM3P0C091 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FREM3P0C091 AL133477.1-201ENST00000457472 514 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 PLGLA-201ENST00000465668 449 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
FREM3P0C091 OR5AP1P-201ENST00000529730 940 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.33□□□□□ -1.88
FREM3P0C091 AC024220.1-201ENST00000603675 484 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 AC069200.1-201ENST00000609511 323 ntBASIC3.33□□□□□ -1.88
FREM3P0C091 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.33□□□□□ -1.88
FREM3P0C091 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
FREM3P0C091 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.32□□□□□ -1.88
FREM3P0C091 AC007066.1-201ENST00000392902 381 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 LAP3P1-201ENST00000403648 294 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 ZNF602P-201ENST00000405929 924 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC234781.4-201ENST00000419384 244 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms