Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL035411.2-201ENST00000604022 421 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 AL365400.2-201ENST00000605604 902 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGB1P09429 AC006329.2-201ENST00000611491 394 ntBASIC5.95□□□□□ -1.46
HMGB1P09429 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
HMGB1P09429 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HMGB1P09429 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HMGB1P09429 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB1P09429 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB1P09429 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB1P09429 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB1P09429 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB1P09429 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 SNURFL-201ENST00000309296 343 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC007685.1-201ENST00000329806 452 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 SNORA31-201ENST00000362607 130 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 SNORA7.2-201ENST00000364446 145 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 RNU6-629P-201ENST00000384061 103 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 SNORA66-201ENST00000384792 133 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC013442.1-201ENST00000397347 228 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGB1P09429 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 HSFY7P-201ENST00000432672 318 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 GTF2IP7-202ENST00000436677 309 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 HSFY8P-201ENST00000437934 318 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AL121877.1-201ENST00000453704 622 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 HSFY5P-201ENST00000453726 309 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC093166.2-201ENST00000455969 1017 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGB1P09429 RPS20P24-201ENST00000457473 361 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 RPS17P2-201ENST00000461663 408 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 HMGN2P25-201ENST00000486956 268 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB1P09429 RN7SL244P-201ENST00000493405 297 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 COX6B1P5-201ENST00000509843 249 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 AC012339.2-201ENST00000523996 453 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 OR4A12P-201ENST00000530847 918 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB1P09429 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB1P09429 MTND3P13-201ENST00000574391 343 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 MIR1269B-201ENST00000580405 75 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGB1P09429 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 AC007687.1-201ENST00000602704 304 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AC105254.2-201ENST00000603636 436 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 TAS2R6P-201ENST00000605022 826 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB1P09429 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 AC027290.2-201ENST00000623210 18662 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB1P09429 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB1P09429 MTCO1P11-201ENST00000429111 1528 ntBASIC5.94□□□□□ -1.46
HMGB1P09429 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB1P09429 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB1P09429 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HMGB1P09429 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HMGB1P09429 RNU4-51P-201ENST00000364206 140 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 MIR607-201ENST00000385241 96 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 Z97832.1-201ENST00000402490 328 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB1P09429 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB1P09429 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB1P09429 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB1P09429 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 SDR42E1P3-201ENST00000438345 502 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 USP9YP22-201ENST00000438971 294 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB1P09429 AL137845.2-201ENST00000444292 988 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 VN1R10P-201ENST00000447106 875 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 BTF3P6-201ENST00000448054 499 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AC112492.1-201ENST00000449607 712 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB1P09429 AL691482.1-201ENST00000453255 87 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB1P09429 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB1P09429 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB1P09429 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB1P09429 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB1P09429 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB1P09429 MTATP6P9-201ENST00000515039 680 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AC087808.1-201ENST00000520501 361 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 AL139174.1-201ENST00000531489 886 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 OR7E128P-201ENST00000532736 1024 ntBASIC5.93□□□□□ -1.46
HMGB1P09429 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGB1P09429 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB1P09429 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGB1P09429 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms