Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RB1P06400 AC092162.3-201ENST00000624511 1624 ntBASIC4.79□□□□□ -1.64
RB1P06400 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.79□□□□□ -1.64
RB1P06400 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 AC104446.1-201ENST00000613728 1321 ntBASIC4.79□□□□□ -1.64
RB1P06400 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RB1P06400 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 RNU5B-1-201ENST00000363286 116 ntBASIC4.79□□□□□ -1.64
RB1P06400 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RB1P06400 RN7SKP202-201ENST00000410439 330 ntBASIC4.79□□□□□ -1.64
RB1P06400 AC096533.1-201ENST00000411645 353 ntBASIC4.79□□□□□ -1.64
RB1P06400 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.79□□□□□ -1.64
RB1P06400 COX6CP15-201ENST00000426313 211 ntBASIC4.79□□□□□ -1.64
RB1P06400 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.79□□□□□ -1.64
RB1P06400 AC004938.1-201ENST00000438468 308 ntBASIC4.79□□□□□ -1.64
RB1P06400 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.79□□□□□ -1.64
RB1P06400 OR51B8P-201ENST00000449892 769 ntBASIC4.79□□□□□ -1.64
RB1P06400 DNAJC19P8-201ENST00000452887 259 ntBASIC4.79□□□□□ -1.64
RB1P06400 RPL37P3-201ENST00000456825 293 ntBASIC4.79□□□□□ -1.64
RB1P06400 RNA5SP103-201ENST00000459503 118 ntBASIC4.79□□□□□ -1.64
RB1P06400 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.79□□□□□ -1.64
RB1P06400 AC008427.1-201ENST00000503102 655 ntBASIC4.79□□□□□ -1.64
RB1P06400 AC026414.1-201ENST00000504046 698 ntBASIC4.79□□□□□ -1.64
RB1P06400 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 SNORA67.7-201ENST00000516664 135 ntBASIC4.79□□□□□ -1.64
RB1P06400 COX6B1P6-201ENST00000522347 255 ntBASIC4.79□□□□□ -1.64
RB1P06400 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.79□□□□□ -1.64
RB1P06400 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.79□□□□□ -1.64
RB1P06400 AC090312.2-201ENST00000582687 378 ntBASIC4.79□□□□□ -1.64
RB1P06400 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.79□□□□□ -1.64
RB1P06400 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 AP002802.2-201ENST00000605877 235 ntBASIC4.79□□□□□ -1.64
RB1P06400 AC022079.2-201ENST00000619739 566 ntBASIC4.79□□□□□ -1.64
RB1P06400 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.79□□□□□ -1.64
RB1P06400 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
RB1P06400 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RB1P06400 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 LINC00622-201ENST00000562811 1570 ntBASIC4.78□□□□□ -1.64
RB1P06400 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
RB1P06400 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 NSRP1P1-201ENST00000444067 1693 ntBASIC4.78□□□□□ -1.64
RB1P06400 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 OR52E6-202ENST00000379946 954 ntBASIC4.78□□□□□ -1.64
RB1P06400 MIR3065-201ENST00000390137 79 ntBASIC4.78□□□□□ -1.64
RB1P06400 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 AC234782.4-201ENST00000417646 1048 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC246680.2-201ENST00000422106 389 ntBASIC4.78□□□□□ -1.64
RB1P06400 OR5AW1P-201ENST00000426334 1006 ntBASIC4.78□□□□□ -1.64
RB1P06400 AL451062.2-201ENST00000427515 271 ntBASIC4.78□□□□□ -1.64
RB1P06400 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.78□□□□□ -1.64
RB1P06400 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 AL132838.2-201ENST00000492041 314 ntBASIC4.78□□□□□ -1.64
RB1P06400 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.78□□□□□ -1.64
RB1P06400 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.78□□□□□ -1.64
RB1P06400 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.78□□□□□ -1.64
RB1P06400 AC008562.1-201ENST00000521763 330 ntBASIC4.78□□□□□ -1.64
RB1P06400 YWHAZP1-201ENST00000556286 722 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC023824.3-201ENST00000569003 562 ntBASIC4.78□□□□□ -1.64
RB1P06400 AGGF1P6-201ENST00000569213 976 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC110743.1-201ENST00000584870 478 ntBASIC4.78□□□□□ -1.64
RB1P06400 NTAN1P1-201ENST00000603150 646 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC011458.1-201ENST00000604034 617 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 SNX18P1Y-201ENST00000616231 511 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC123768.4-201ENST00000616244 701 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC006133.1-201ENST00000617106 264 ntBASIC4.78□□□□□ -1.64
RB1P06400 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.78□□□□□ -1.64
RB1P06400 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 AC140479.6-201ENST00000633535 357 ntBASIC4.78□□□□□ -1.64
RB1P06400 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RB1P06400 AL118496.1-201ENST00000440201 1812 ntBASIC4.78□□□□□ -1.64
RB1P06400 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 LINC01355-201ENST00000566551 5444 ntBASIC4.78□□□□□ -1.64
RB1P06400 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RB1P06400 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.78□□□□□ -1.64
RB1P06400 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.78□□□□□ -1.64
RB1P06400 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
RB1P06400 LARP1BP1-201ENST00000506036 1359 ntBASIC4.78□□□□□ -1.64
RB1P06400 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
RB1P06400 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
RB1P06400 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 AC114546.3-201ENST00000623582 1734 ntBASIC4.77□□□□□ -1.65
RB1P06400 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RB1P06400 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.77□□□□□ -1.65
RB1P06400 AC008033.1-201ENST00000216407 1162 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms