Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 AC000111.2-201ENST00000448200 210 ntBASIC4.48□□□□□ -1.69
LDLRP01130 EXOSC3P1-201ENST00000448649 500 ntBASIC4.48□□□□□ -1.69
LDLRP01130 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 OR51B8P-201ENST00000449892 769 ntBASIC4.48□□□□□ -1.69
LDLRP01130 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 AC026402.1-201ENST00000513642 170 ntBASIC4.48□□□□□ -1.69
LDLRP01130 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AC091163.3-201ENST00000518269 1144 ntBASIC4.48□□□□□ -1.69
LDLRP01130 HMGB1P1-201ENST00000522557 636 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AC083923.1-201ENST00000523708 376 ntBASIC4.48□□□□□ -1.69
LDLRP01130 DUXAP5-201ENST00000529668 529 ntBASIC4.48□□□□□ -1.69
LDLRP01130 OR8K4P-201ENST00000534608 872 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.48□□□□□ -1.69
LDLRP01130 AC010857.1-201ENST00000606398 594 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 AC116447.1-201ENST00000613153 453 ntBASIC4.48□□□□□ -1.69
LDLRP01130 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AL121890.3-201ENST00000618494 516 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AC024595.1-201ENST00000623088 387 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AL078595.3-201ENST00000623815 1166 ntBASIC4.48□□□□□ -1.69
LDLRP01130 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.48□□□□□ -1.69
LDLRP01130 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LDLRP01130 AC139713.2-210ENST00000641741 992 ntBASIC4.48□□□□□ -1.69
LDLRP01130 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.48□□□□□ -1.69
LDLRP01130 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 RNF6P1-201ENST00000444889 1784 ntBASIC4.48□□□□□ -1.69
LDLRP01130 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 IQCB2P-201ENST00000401788 1633 ntBASIC4.47□□□□□ -1.69
LDLRP01130 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 AL137100.1-201ENST00000556703 1620 ntBASIC4.47□□□□□ -1.69
LDLRP01130 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 AC139713.2-214ENST00000642059 1811 ntBASIC4.47□□□□□ -1.69
LDLRP01130 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 SEC63P2-201ENST00000503863 1939 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC009229.4-201ENST00000623854 1947 ntBASIC4.47□□□□□ -1.69
LDLRP01130 ENSAP3-201ENST00000312710 333 ntBASIC4.47□□□□□ -1.69
LDLRP01130 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 RNU1-108P-201ENST00000362556 161 ntBASIC4.47□□□□□ -1.69
LDLRP01130 DNAJC19P6-201ENST00000401853 280 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.47□□□□□ -1.69
LDLRP01130 BX510359.2-201ENST00000417920 305 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 EIF4EP1-201ENST00000422311 642 ntBASIC4.47□□□□□ -1.69
LDLRP01130 YWHAEP5-201ENST00000431545 765 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.47□□□□□ -1.69
LDLRP01130 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.47□□□□□ -1.69
LDLRP01130 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.47□□□□□ -1.69
LDLRP01130 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 RPL12P20-201ENST00000475538 479 ntBASIC4.47□□□□□ -1.69
LDLRP01130 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.47□□□□□ -1.69
LDLRP01130 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 RN7SKP276-201ENST00000516242 268 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.47□□□□□ -1.69
LDLRP01130 MORF4L1P3-201ENST00000525966 950 ntBASIC4.47□□□□□ -1.69
LDLRP01130 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 AP001880.2-201ENST00000538233 448 ntBASIC4.47□□□□□ -1.69
LDLRP01130 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 AC015912.2-201ENST00000571053 181 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC027455.1-201ENST00000574104 594 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.47□□□□□ -1.69
LDLRP01130 MTCO2P2-201ENST00000591258 225 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC125494.3-201ENST00000602759 455 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC093765.1-201ENST00000603758 881 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC073387.2-201ENST00000604797 784 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AL356218.2-201ENST00000605264 187 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC005962.2-201ENST00000611427 652 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC009464.1-201ENST00000615731 469 ntBASIC4.47□□□□□ -1.69
LDLRP01130 STMN1P1-201ENST00000617809 440 ntBASIC4.47□□□□□ -1.69
LDLRP01130 AC068137.4-201ENST00000638485 296 ntBASIC4.47□□□□□ -1.69
LDLRP01130 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
LDLRP01130 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDLRP01130 AC074029.4-201ENST00000624796 1859 ntBASIC4.47□□□□□ -1.69
LDLRP01130 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.47□□□□□ -1.69
LDLRP01130 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LDLRP01130 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.69
LDLRP01130 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.46□□□□□ -1.69
LDLRP01130 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LDLRP01130 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.69
LDLRP01130 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
LDLRP01130 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms