Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SSSCA1O60232 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.96□□□□□ -1.94
SSSCA1O60232 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSSCA1O60232 AC007656.2-201ENST00000624902 4547 ntBASIC2.96□□□□□ -1.94
SSSCA1O60232 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
SSSCA1O60232 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSSCA1O60232 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSSCA1O60232 RNU6-146P-201ENST00000384602 108 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSSCA1O60232 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSSCA1O60232 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 RPS15AP6-201ENST00000420703 385 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 OSTCP5-201ENST00000425293 453 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.95□□□□□ -1.94
SSSCA1O60232 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.95□□□□□ -1.94
SSSCA1O60232 CASP3P1-201ENST00000446037 609 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.95□□□□□ -1.94
SSSCA1O60232 RPS3AP46-201ENST00000448352 682 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 AL162151.2-201ENST00000448875 158 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.95□□□□□ -1.94
SSSCA1O60232 CYCSP53-201ENST00000455540 265 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 NDUFA12P1-201ENST00000455914 406 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 RPS4XP2-201ENST00000458402 793 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 AC010401.1-201ENST00000463867 348 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 RPL9P32-201ENST00000464118 620 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 RPL6P9-201ENST00000466502 859 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 CYCSP20-201ENST00000473154 315 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 RPS4XP15-201ENST00000489210 795 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC023161.2-201ENST00000551218 780 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.95□□□□□ -1.94
SSSCA1O60232 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 RNU4-89P-201ENST00000607443 133 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 AC103710.3-201ENST00000608157 948 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.95□□□□□ -1.94
SSSCA1O60232 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSSCA1O60232 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 BX005019.1-201ENST00000561881 1810 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 AC100871.1-201ENST00000507871 1456 ntBASIC2.95□□□□□ -1.94
SSSCA1O60232 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SSSCA1O60232 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
SSSCA1O60232 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSSCA1O60232 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSSCA1O60232 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSSCA1O60232 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.94□□□□□ -1.94
SSSCA1O60232 RNU6-328P-201ENST00000390887 106 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 RN7SKP278-201ENST00000410504 342 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AL139128.1-201ENST00000413921 941 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.94□□□□□ -1.94
SSSCA1O60232 RPS27AP7-201ENST00000422792 455 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AL138785.1-201ENST00000425821 331 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 BX679664.1-201ENST00000434429 253 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC010655.1-201ENST00000449336 292 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 RPL7P31-201ENST00000450192 724 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.94□□□□□ -1.94
SSSCA1O60232 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.94□□□□□ -1.94
SSSCA1O60232 SEPT7P6-201ENST00000469999 1143 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AC084357.1-201ENST00000473404 255 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AC008638.1-201ENST00000506035 866 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.94□□□□□ -1.94
SSSCA1O60232 MIR5047-201ENST00000579212 100 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AL592436.1-201ENST00000605135 558 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 AC022149.2-201ENST00000621061 203 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 C2orf27A-204ENST00000623058 969 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AP000553.6-201ENST00000641242 118 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.94□□□□□ -1.94
SSSCA1O60232 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
SSSCA1O60232 AC068647.1-201ENST00000489539 2265 ntBASIC2.94□□□□□ -1.94
SSSCA1O60232 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SSSCA1O60232 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SSSCA1O60232 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms