Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC114546.3-201ENST00000623582 1734 ntBASIC4.28□□□□□ -1.72
SSX4O60224 MAPK10-304ENST00000641341 3984 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX4O60224 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 CYP1D1P-201ENST00000416662 1433 ntBASIC4.28□□□□□ -1.72
SSX4O60224 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
SSX4O60224 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX4O60224 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 Z98755.1-201ENST00000407015 1384 ntBASIC4.27□□□□□ -1.73
SSX4O60224 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SSX4O60224 Y_RNA.472-201ENST00000384322 102 ntBASIC4.27□□□□□ -1.73
SSX4O60224 LRRC37BP1-201ENST00000398851 714 ntBASIC4.27□□□□□ -1.73
SSX4O60224 U3.35-201ENST00000408405 208 ntBASIC4.27□□□□□ -1.73
SSX4O60224 RN7SKP167-201ENST00000411047 285 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AL590139.1-201ENST00000416267 400 ntBASIC4.27□□□□□ -1.73
SSX4O60224 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
SSX4O60224 RAC1P8-201ENST00000427086 527 ntBASIC4.27□□□□□ -1.73
SSX4O60224 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 HIGD1AP12-201ENST00000427832 281 ntBASIC4.27□□□□□ -1.73
SSX4O60224 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.27□□□□□ -1.73
SSX4O60224 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX4O60224 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 AL138878.2-201ENST00000440581 1241 ntBASIC4.27□□□□□ -1.73
SSX4O60224 OR7E125P-201ENST00000443450 846 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 AL354714.3-201ENST00000447284 493 ntBASIC4.27□□□□□ -1.73
SSX4O60224 MRPL42P4-201ENST00000453267 443 ntBASIC4.27□□□□□ -1.73
SSX4O60224 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 RPL5P30-201ENST00000465511 891 ntBASIC4.27□□□□□ -1.73
SSX4O60224 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 FTH1P24-201ENST00000503502 462 ntBASIC4.27□□□□□ -1.73
SSX4O60224 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX4O60224 RPL7L1P13-201ENST00000511702 739 ntBASIC4.27□□□□□ -1.73
SSX4O60224 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 OR4A2P-201ENST00000527276 913 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX4O60224 MTND1P24-201ENST00000552175 861 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 UBE2FP2-201ENST00000566646 462 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AGGF1P5-201ENST00000567900 919 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX4O60224 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX4O60224 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.27□□□□□ -1.73
SSX4O60224 MIR4666A-201ENST00000580160 79 ntBASIC4.27□□□□□ -1.73
SSX4O60224 MIR4737-201ENST00000583979 81 ntBASIC4.27□□□□□ -1.73
SSX4O60224 SLC25A36P1-201ENST00000590111 465 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AL392112.1-201ENST00000605115 829 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AC090948.2-201ENST00000607363 564 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AC009974.1-201ENST00000608881 455 ntBASIC4.27□□□□□ -1.73
SSX4O60224 MIR378J-201ENST00000611988 109 ntBASIC4.27□□□□□ -1.73
SSX4O60224 AL731566.2-201ENST00000618971 317 ntBASIC4.27□□□□□ -1.73
SSX4O60224 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 ZNF663P-202ENST00000641770 1131 ntBASIC4.27□□□□□ -1.73
SSX4O60224 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.27□□□□□ -1.73
SSX4O60224 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSX4O60224 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.27□□□□□ -1.73
SSX4O60224 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SSX4O60224 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSX4O60224 EOGT-210ENST00000615922 1931 ntBASIC4.27□□□□□ -1.73
SSX4O60224 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSX4O60224 AC016716.1-201ENST00000265882 708 ntBASIC4.26□□□□□ -1.73
SSX4O60224 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 RNA5SP52-201ENST00000362448 134 ntBASIC4.26□□□□□ -1.73
SSX4O60224 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 AL079342.2-201ENST00000403367 482 ntBASIC4.26□□□□□ -1.73
SSX4O60224 GSTA8P-201ENST00000404253 637 ntBASIC4.26□□□□□ -1.73
SSX4O60224 HNRNPDP2-201ENST00000406475 478 ntBASIC4.26□□□□□ -1.73
SSX4O60224 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 RNU4-22P-201ENST00000411058 166 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AF186996.5-201ENST00000418098 904 ntBASIC4.26□□□□□ -1.73
SSX4O60224 PDSS1P1-201ENST00000422953 1114 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms