Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNORD6-201ENST00000365444 73 ntBASIC3.61□□□□□ -1.83
SGCEO43556 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 GSTA12P-201ENST00000402398 508 ntBASIC3.61□□□□□ -1.83
SGCEO43556 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGCEO43556 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.61□□□□□ -1.83
SGCEO43556 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 MTND4P11-201ENST00000417020 1058 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.61□□□□□ -1.83
SGCEO43556 MTCO1P54-201ENST00000430139 712 ntBASIC3.61□□□□□ -1.83
SGCEO43556 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 AC009263.1-201ENST00000441193 1239 ntBASIC3.61□□□□□ -1.83
SGCEO43556 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.61□□□□□ -1.83
SGCEO43556 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.61□□□□□ -1.83
SGCEO43556 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AL136097.1-201ENST00000456945 913 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC087385.1-201ENST00000475062 312 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.61□□□□□ -1.83
SGCEO43556 AC091167.1-201ENST00000492017 396 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC012170.1-201ENST00000495139 359 ntBASIC3.61□□□□□ -1.83
SGCEO43556 HMGB1P21-201ENST00000502313 581 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC025554.1-201ENST00000505641 188 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC108120.2-201ENST00000512973 294 ntBASIC3.61□□□□□ -1.83
SGCEO43556 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGCEO43556 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 C1GALT1P3-201ENST00000522049 819 ntBASIC3.61□□□□□ -1.83
SGCEO43556 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SGCEO43556 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGCEO43556 RPL23AP87-202ENST00000573039 466 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC012417.1-201ENST00000582307 1039 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 AC005255.1-201ENST00000593748 216 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 AL451044.1-201ENST00000604867 238 ntBASIC3.61□□□□□ -1.83
SGCEO43556 HMGB1P51-201ENST00000605166 638 ntBASIC3.61□□□□□ -1.83
SGCEO43556 MIR486-1-201ENST00000612171 68 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC011472.4-201ENST00000615848 491 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC090246.1-201ENST00000616499 426 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC099669.2-201ENST00000616549 437 ntBASIC3.61□□□□□ -1.83
SGCEO43556 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SGCEO43556 AC004943.3-201ENST00000624116 600 ntBASIC3.61□□□□□ -1.83
SGCEO43556 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SGCEO43556 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 AC005261.4-201ENST00000600047 1385 ntBASIC3.61□□□□□ -1.83
SGCEO43556 AC116667.1-201ENST00000604855 2072 ntBASIC3.61□□□□□ -1.83
SGCEO43556 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 MAPK10-373ENST00000641983 6772 ntBASIC3.6□□□□□ -1.83
SGCEO43556 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.6□□□□□ -1.83
SGCEO43556 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SGCEO43556 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SGCEO43556 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.6□□□□□ -1.83
SGCEO43556 RPS24P8-201ENST00000431490 402 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AL031663.1-201ENST00000437445 219 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.6□□□□□ -1.83
SGCEO43556 AC006011.1-201ENST00000442758 349 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AL353898.1-201ENST00000444055 238 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.6□□□□□ -1.83
SGCEO43556 TPMTP4-201ENST00000450749 678 ntBASIC3.6□□□□□ -1.83
SGCEO43556 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 RPL7P1-201ENST00000468161 747 ntBASIC3.6□□□□□ -1.83
SGCEO43556 RPL7P9-201ENST00000468715 747 ntBASIC3.6□□□□□ -1.83
SGCEO43556 RN7SL481P-201ENST00000477764 299 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC105137.1-201ENST00000484355 562 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC093824.1-201ENST00000508796 343 ntBASIC3.6□□□□□ -1.83
SGCEO43556 OR5H4P-201ENST00000510851 923 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 RN7SKP82-201ENST00000516786 223 ntBASIC3.6□□□□□ -1.83
SGCEO43556 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SGCEO43556 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.6□□□□□ -1.83
SGCEO43556 OR4U1P-201ENST00000554958 912 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC106785.3-201ENST00000564064 847 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 AP001180.3-201ENST00000582221 145 ntBASIC3.6□□□□□ -1.83
SGCEO43556 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.6□□□□□ -1.83
SGCEO43556 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
SGCEO43556 AC104662.1-201ENST00000604448 511 ntBASIC3.6□□□□□ -1.83
SGCEO43556 ARF4P1-201ENST00000605447 541 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC138473.1-201ENST00000605717 526 ntBASIC3.6□□□□□ -1.83
SGCEO43556 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.6□□□□□ -1.83
SGCEO43556 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.6□□□□□ -1.83
SGCEO43556 MIR8059-201ENST00000620427 81 ntBASIC3.6□□□□□ -1.83
SGCEO43556 C2orf27A-204ENST00000623058 969 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC020978.9-201ENST00000624380 1141 ntBASIC3.6□□□□□ -1.83
SGCEO43556 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.6□□□□□ -1.83
SGCEO43556 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SGCEO43556 LARP1BP1-201ENST00000506036 1359 ntBASIC3.6□□□□□ -1.83
SGCEO43556 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.83
SGCEO43556 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.59□□□□□ -1.83
SGCEO43556 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.59□□□□□ -1.83
SGCEO43556 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SGCEO43556 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms