Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AL157884.3-201ENST00000448273 1184 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 TPT1P13-201ENST00000449760 499 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.71□□□□□ -1.66
SMAD6O43541 RNA5SP103-201ENST00000459503 118 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AC104763.1-201ENST00000475274 360 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AC011037.1-201ENST00000483964 558 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AK3P4-201ENST00000504283 583 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AK4P6-201ENST00000505168 528 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AC113430.1-201ENST00000506872 718 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.71□□□□□ -1.66
SMAD6O43541 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.71□□□□□ -1.66
SMAD6O43541 MTCYBP20-201ENST00000524239 1129 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 MTND2P26-201ENST00000528255 1029 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 AP001781.1-201ENST00000530977 207 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.71□□□□□ -1.66
SMAD6O43541 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 AC068790.6-201ENST00000602558 258 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 VIS1.1-201ENST00000610517 203 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.71□□□□□ -1.66
SMAD6O43541 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.71□□□□□ -1.66
SMAD6O43541 AC007671.2-201ENST00000637344 619 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SMAD6O43541 ZNF137P-201ENST00000456718 1920 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SMAD6O43541 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
SMAD6O43541 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 SMG1P4-204ENST00000523028 4131 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 DHX9P1-201ENST00000436565 3076 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 RNU6-984P-201ENST00000363236 109 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 MIR659-201ENST00000384963 97 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 RPS3AP23-201ENST00000401762 784 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 FABP12P1-201ENST00000401911 322 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL034374.1-201ENST00000406329 351 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 Y_RNA.619-201ENST00000410951 90 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 RPL12P34-201ENST00000424532 479 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC007563.3-201ENST00000433233 371 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL162388.1-201ENST00000450912 352 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 RPL31P3-201ENST00000458430 332 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 snoU13.1-201ENST00000459157 104 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 SCARNA10-201ENST00000459255 330 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 RPL6P9-201ENST00000466502 859 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 MTND2P14-201ENST00000482139 351 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC107401.1-201ENST00000503426 685 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC010625.1-201ENST00000511296 403 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 RNU6-319P-201ENST00000516025 108 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 RNU6-1028P-201ENST00000517164 93 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC022882.1-201ENST00000532142 501 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC084824.1-201ENST00000550917 1005 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.7□□□□□ -1.66
SMAD6O43541 AL035411.2-201ENST00000604022 421 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL133338.2-201ENST00000604292 736 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AC024060.1-201ENST00000607052 494 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 AC245100.7-201ENST00000609678 442 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL603755.1-201ENST00000619504 163 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.7□□□□□ -1.66
SMAD6O43541 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms