Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 AL133264.1-201ENST00000407157 562 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 RPL7P57-201ENST00000423238 740 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 MRPL48P1-201ENST00000445390 636 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AL589765.3-201ENST00000446084 462 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 SBDSP1-204ENST00000453858 737 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 USP9YP25-201ENST00000457708 443 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 MTCO1P30-201ENST00000515244 580 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 RNU1-6P-201ENST00000516290 144 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 OR5D15P-201ENST00000531671 942 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC009094.1-201ENST00000564443 426 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC145350.1-201ENST00000567426 208 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC079171.1-201ENST00000568788 914 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC074051.3-201ENST00000570238 358 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 OR4K7P-201ENST00000580232 945 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.52□□□□□ -1.53
PRPF3O43395 VN1R78P-201ENST00000597393 564 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 AL391358.1-201ENST00000605342 190 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC092954.1-201ENST00000609121 445 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 AC092106.3-201ENST00000611308 722 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 SAGE4P-201ENST00000442271 3381 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRPF3O43395 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 AC107081.3-201ENST00000612715 2034 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 AL031119.1-201ENST00000404707 1879 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF3O43395 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF3O43395 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF3O43395 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF3O43395 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 SDAD1P1-202ENST00000524156 2051 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC104454.1-201ENST00000421341 1401 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF3O43395 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 AL590762.2-201ENST00000395798 571 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 MTND4P13-201ENST00000402078 1023 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 RN7SKP100-201ENST00000411258 284 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 RSU1P3-201ENST00000412878 835 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 NRBF2P2-201ENST00000413087 861 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 AL008987.1-201ENST00000415528 237 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 RPL7P44-201ENST00000424827 742 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 RPL21P43-201ENST00000425440 472 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 IFNNP1-201ENST00000429219 553 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 AC008072.1-201ENST00000434254 824 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.51□□□□□ -1.53
PRPF3O43395 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 AC073648.4-201ENST00000442655 781 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.51□□□□□ -1.53
PRPF3O43395 OR1H1P-201ENST00000448731 937 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC010307.1-201ENST00000467206 836 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AP000893.1-201ENST00000474462 794 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 RN7SKP82-201ENST00000516786 223 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.51□□□□□ -1.53
PRPF3O43395 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF3O43395 AC084757.1-201ENST00000559987 490 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 MIR3667-201ENST00000581025 74 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 AL451074.6-201ENST00000608512 729 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 AC019226.2-201ENST00000625973 424 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 MIR4278-201ENST00000636094 69 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 MTND2P41-201ENST00000637599 773 ntBASIC5.51□□□□□ -1.53
PRPF3O43395 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.51□□□□□ -1.53
PRPF3O43395 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF3O43395 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.51□□□□□ -1.53
PRPF3O43395 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms