Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 OR52B1P-201ENST00000316506 909 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 RPL22P22-201ENST00000395439 379 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 HMGB3P19-201ENST00000403971 560 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC188H7C350 RPL23AP27-201ENST00000415161 451 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC188H7C350 RPL30P3-201ENST00000424262 333 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC188H7C350 RPL37P1-201ENST00000432310 284 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC188H7C350 RPL21P110-201ENST00000433345 446 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC188H7C350 TPTE2P3-201ENST00000441562 1189 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 AC005002.1-201ENST00000447458 540 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AL162591.2-201ENST00000449634 317 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 MRPL35P4-201ENST00000453682 566 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC188H7C350 RPL7AP6-201ENST00000477943 801 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 RN7SL826P-201ENST00000479724 288 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC073522.1-201ENST00000483312 377 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC188H7C350 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC188H7C350 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 AP001781.1-201ENST00000530977 207 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC188H7C350 AP000919.1-202ENST00000581139 1264 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 BNIP3P4-201ENST00000604946 565 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC005014.3-201ENST00000605985 190 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC010857.1-201ENST00000606398 594 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC068880.4-201ENST00000623082 495 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 AL138960.2-201ENST00000625145 535 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC188H7C350 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 IQCB2P-201ENST00000401788 1633 ntBASIC4.45□□□□□ -1.7
CCDC188H7C350 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 ZNF849P-201ENST00000594711 1566 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 AL133243.3-201ENST00000617415 3004 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC188H7C350 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC188H7C350 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC188H7C350 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC188H7C350 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC188H7C350 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 MIR298-201ENST00000401212 88 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AL133270.1-201ENST00000402635 279 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 SNRPFP1-201ENST00000414761 252 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC188H7C350 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC011242.1-201ENST00000433596 1158 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC023347.2-201ENST00000433994 462 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 FABP5P3-201ENST00000437960 408 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC188H7C350 AC008280.2-201ENST00000455473 307 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 DHFRP3-201ENST00000455595 559 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 RPL23AP2-201ENST00000471227 466 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC188H7C350 NDUFA5P12-201ENST00000503796 343 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC188H7C350 HMGB3P13-201ENST00000511263 607 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC188H7C350 SNORD116-26-201ENST00000516006 96 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC010476.1-201ENST00000519111 851 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 AC090819.1-201ENST00000523800 1111 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC188H7C350 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC063950.1-201ENST00000552036 308 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 SERPINE4P-201ENST00000554978 281 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC010735.1-201ENST00000567305 1026 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC068790.5-201ENST00000602741 355 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC091488.1-201ENST00000604239 660 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 BNIP3P31-201ENST00000604515 566 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC005084.1-201ENST00000605160 304 ntBASIC4.44□□□□□ -1.7
CCDC188H7C350 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC188H7C350 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC188H7C350 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC188H7C350 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC188H7C350 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC188H7C350 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms