Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL354719.1-201ENST00000406535 843 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS3P2-201ENST00000421346 701 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 BX890604.2-201ENST00000427883 474 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 HIGD1AP4-201ENST00000430194 280 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC011998.1-201ENST00000433403 117 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC064862.4-201ENST00000442180 334 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS17P13-201ENST00000448974 407 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 CCRL1P1-201ENST00000449542 1053 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 HMGN1P18-201ENST00000457642 277 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS4XP2-201ENST00000458402 793 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 VN1R17P-201ENST00000472048 1090 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC090114.3-201ENST00000479267 829 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 HMGB3P14-201ENST00000494195 599 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SL649P-201ENST00000496974 275 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU2-45P-201ENST00000516068 187 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU6-56P-201ENST00000516986 93 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC239860.2-201ENST00000525886 270 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL110118.1-201ENST00000553543 400 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC091304.5-201ENST00000568969 158 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL138895.2-201ENST00000603019 178 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL109653.1-201ENST00000603091 248 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL512782.1-201ENST00000603093 364 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC079587.1-201ENST00000603846 277 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC093799.2-201ENST00000610062 578 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC126915.2-201ENST00000610957 190 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 Mico1.1-201ENST00000611698 204 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AL133243.1-201ENST00000614487 366 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC073348.1-201ENST00000623002 331 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC004925.1-201ENST00000624256 2706 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 AC011978.2-201ENST00000569835 2054 ntBASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.05□□□□□ -2.08
CHKB-CPT1BH3BT56 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR30E-201ENST00000362104 92 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 SNORA60-201ENST00000362396 134 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU6-283P-201ENST00000364788 107 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 MT-TP-201ENST00000387461 68 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 SSXP9-201ENST00000417503 292 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 GTF2IP23-201ENST00000423746 351 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 NRBF2P3-201ENST00000432731 865 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 SLC25A24P1-202ENST00000434803 1220 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC110602.1-201ENST00000437414 318 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL21P2-201ENST00000440049 481 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RSL24D1P2-201ENST00000445584 366 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 EEF1B2P3-201ENST00000447718 678 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RPS3AP46-201ENST00000448352 682 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC018638.3-201ENST00000461273 132 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC092691.2-201ENST00000461787 803 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL21P18-201ENST00000469899 480 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 NPM1P17-201ENST00000479221 602 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AL139099.1-201ENST00000497398 403 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC020893.1-201ENST00000502452 580 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 GAPDHP56-201ENST00000506031 988 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms