Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR5BE1P-202ENST00000641168 1176 ntBASIC3.93□□□□□ -1.78
TMX2-CTNND1H3BSU7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TMX2-CTNND1H3BSU7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.93□□□□□ -1.78
TMX2-CTNND1H3BSU7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 RNU4-23P-201ENST00000362839 140 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 SNORA3C-201ENST00000408792 125 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 RNU4-6P-201ENST00000410804 122 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC011742.1-201ENST00000431448 434 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC006011.1-201ENST00000442758 349 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC099063.2-201ENST00000446360 662 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC239809.1-201ENST00000450470 217 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC006517.1-201ENST00000480485 328 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 RPS3AP6-201ENST00000484430 795 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC018797.3-201ENST00000513388 1241 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC018442.3-201ENST00000523025 183 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC090819.1-201ENST00000523800 1111 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC025946.2-201ENST00000603398 234 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL713998.2-201ENST00000604538 1198 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 OR6R2P-201ENST00000609216 300 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL158062.1-201ENST00000619632 745 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL592437.2-201ENST00000421655 2434 ntBASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMX2-CTNND1H3BSU7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC093908.1-201ENST00000623125 8092 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 RNU6-213P-201ENST00000384051 104 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 MIR7-3-201ENST00000384898 110 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL607077.1-201ENST00000401718 499 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 MTCO1P54-201ENST00000430139 712 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 Z85994.2-201ENST00000434327 452 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 snoU13.22-201ENST00000459428 104 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 EIF2S2P4-201ENST00000461070 984 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC025627.2-201ENST00000576220 160 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 MIR5684-201ENST00000585074 65 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC024220.1-201ENST00000603675 484 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 SNORA51-201ENST00000606420 132 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC117490.2-201ENST00000610042 594 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 MIR486-1-201ENST00000612171 68 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC103858.2-201ENST00000621471 543 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 ERCC6-202ENST00000374127 1782 ntBASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC010329.2-201ENST00000595195 2737 ntBASIC3.9□□□□□ -1.78
TMX2-CTNND1H3BSU7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.78
TMX2-CTNND1H3BSU7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
TMX2-CTNND1H3BSU7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
TMX2-CTNND1H3BSU7 RNA5SP97-201ENST00000365006 84 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC083799.1-201ENST00000366451 910 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms