Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 DYNLL1P6-201ENST00000503440 264 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 PPBPP1-201ENST00000510807 373 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 RNA5SP154-201ENST00000516193 111 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC019227.1-201ENST00000526902 510 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 ZNF705CP-201ENST00000530515 889 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 MIR1273E-201ENST00000581165 102 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC022001.1-201ENST00000605193 268 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC009779.8-202ENST00000607990 932 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC008759.3-201ENST00000613300 508 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC022306.1-201ENST00000560489 1562 ntBASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGB1P1B2RPK0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AL357515.1-201ENST00000402967 542 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 MIR1275-201ENST00000408770 80 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AL139128.1-201ENST00000413921 941 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 RAD23BP2-201ENST00000416003 1207 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 BOLA3P4-201ENST00000418151 400 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 MTND2P11-201ENST00000423638 648 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AL390119.1-201ENST00000440329 312 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 RPL23AP16-201ENST00000441715 421 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 HMGN2P16-201ENST00000456802 261 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 PABPC1P3-201ENST00000469174 459 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC093801.2-201ENST00000503966 1050 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 OR51K1P-201ENST00000510214 950 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 RNA5SP446-201ENST00000515955 82 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 OR4P1P-201ENST00000530808 1136 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC010547.6-201ENST00000571789 193 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC069307.1-201ENST00000602820 447 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AL512782.1-201ENST00000603093 364 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AC099785.1-201ENST00000605697 437 ntBASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGB1P1B2RPK0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC015813.6-201ENST00000624409 5808 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 RNA5SP52-201ENST00000362448 134 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 RNU1-43P-201ENST00000365052 165 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 SNORA51.8-201ENST00000384234 132 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 SNORA70-201ENST00000384436 135 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 RNA5SP345-201ENST00000410646 108 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 RNU2-71P-201ENST00000411395 189 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AL390774.1-201ENST00000411924 246 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 KRR1P1-201ENST00000419430 803 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC013262.1-201ENST00000426710 252 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC004022.1-201ENST00000447766 1066 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC078785.3-201ENST00000476607 425 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms