Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
RNF11Q9Y3C5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF11Q9Y3C5 AC009229.4-201ENST00000623854 1947 ntBASIC3.64□□□□□ -1.83
RNF11Q9Y3C5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RNF11Q9Y3C5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC134882.1-201ENST00000603738 1676 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 MOB1AP1-201ENST00000430903 535 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 HSFY6P-201ENST00000445573 403 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 TPT1P12-201ENST00000448968 492 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC005255.1-201ENST00000593748 216 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AL158062.1-201ENST00000619632 745 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 FP236240.3-201ENST00000623061 327 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AP002967.1-201ENST00000624203 539 ntBASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF11Q9Y3C5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC100871.1-201ENST00000507871 1456 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 ZNF602P-201ENST00000405929 924 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL512430.2-201ENST00000406786 339 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 SNORA3.3-201ENST00000408712 125 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 RN7SKP285-201ENST00000410137 318 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 Y_RNA.625-201ENST00000411256 107 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC013268.2-201ENST00000420753 337 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 HMGB3P8-201ENST00000449709 577 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 HSPE1P22-201ENST00000456856 327 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 RPL7P48-201ENST00000461513 746 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 RPL7L1P8-201ENST00000469911 741 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 CEACAMP10-202ENST00000495431 496 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC010460.1-201ENST00000507087 466 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 RNA5SP164-201ENST00000516533 110 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC018442.3-201ENST00000523025 183 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC008489.1-201ENST00000524271 483 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 MIR4425-201ENST00000580572 84 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 MIR6875-201ENST00000617506 72 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 ZYXP1-201ENST00000617638 118 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 AC073073.2-201ENST00000609827 2578 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 CASC19-284ENST00000642142 1868 ntBASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF11Q9Y3C5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 RNA5SP424-201ENST00000390988 115 ntBASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF11Q9Y3C5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms