Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 MIR141-201ENST00000384975 95 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AL590806.1-201ENST00000415818 853 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC108032.1-201ENST00000416706 207 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 RPS15AP29-201ENST00000445539 400 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC009220.1-201ENST00000451614 275 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 PPIAP21-201ENST00000464473 501 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC010618.1-201ENST00000469924 477 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 NDUFA5P9-201ENST00000472609 340 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 RN7SL271P-201ENST00000487601 295 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 RPS27AP13-201ENST00000498403 237 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC021087.2-201ENST00000504656 1203 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 HPRT1P2-201ENST00000505250 544 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 HMGB1P47-201ENST00000511281 589 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC093770.1-201ENST00000511559 571 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC084373.1-201ENST00000603311 235 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC119501.1-201ENST00000603646 475 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 Z82195.1-201ENST00000604558 398 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC010200.2-201ENST00000605098 235 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 MIR6716-201ENST00000613413 80 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AL354696.1-201ENST00000614652 497 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC004825.2-201ENST00000616634 455 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC006338.2-201ENST00000616864 791 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 OR52H1-202ENST00000641796 1061 ntBASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 SNORA60-201ENST00000362396 134 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 SNORA62-201ENST00000365493 153 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RNU6-1279P-201ENST00000383917 103 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RNU6-883P-201ENST00000384597 107 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 CCNB2P1-201ENST00000399411 1150 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 MIR1183-201ENST00000408856 89 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RPL30P2-201ENST00000414021 291 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 COX6CP15-201ENST00000426313 211 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC092013.1-201ENST00000438795 332 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AL500527.1-201ENST00000448532 255 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 MTND5P8-201ENST00000449817 1083 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AF213884.1-201ENST00000488102 463 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC090543.1-201ENST00000492168 485 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 HPRT1P1-201ENST00000509498 657 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RNU6-889P-201ENST00000517189 103 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC138701.1-201ENST00000524329 714 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RFPL1S-203ENST00000539579 330 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC022655.2-201ENST00000577280 318 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC023575.1-201ENST00000580510 358 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 MIR3939-201ENST00000582614 106 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AC010608.2-201ENST00000624830 470 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms