Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC010928.1-201ENST00000592477 1447 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPL21P132-201ENST00000331267 462 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC117470.1-201ENST00000381974 330 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-26P-201ENST00000383985 107 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.552-201ENST00000384665 112 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AL359704.1-201ENST00000411586 781 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 Z93019.1-201ENST00000416450 973 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPL34P3-201ENST00000421454 338 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPS7P14-201ENST00000426405 583 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 SETP5-201ENST00000437270 562 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPL32P28-201ENST00000443577 397 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPL23AP20-201ENST00000447965 421 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC079448.1-201ENST00000449377 373 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPSAP39-201ENST00000467439 883 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RPL36AP51-201ENST00000487216 318 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 RN7SL193P-201ENST00000491708 276 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 HMGB3P15-201ENST00000507326 574 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 ATP5LP3-201ENST00000514223 304 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 PTP4A1P6-201ENST00000531034 478 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 OR5B19P-201ENST00000531766 928 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AP001004.1-201ENST00000582468 324 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 COX6CP7-201ENST00000597056 208 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC099676.1-201ENST00000608886 657 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 U2.1-201ENST00000618978 145 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 MIR7159-201ENST00000620587 66 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 AC069234.4-201ENST00000621276 412 ntBASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PDZRN3Q9UPQ7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 DCAF13P3-201ENST00000561147 1334 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC090337.1-201ENST00000579651 2074 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC010168.2-201ENST00000562691 5428 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RNA5SP88-201ENST00000365560 109 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-510P-201ENST00000391239 108 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RPL32P23-201ENST00000397237 405 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 MIR1305-201ENST00000408300 86 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-373P-201ENST00000411247 98 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC007563.3-201ENST00000433233 371 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 UBE2FP3-201ENST00000436366 524 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AL137792.2-201ENST00000443484 235 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 TCEA1P1-201ENST00000449716 880 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC018797.3-201ENST00000513388 1241 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.668-201ENST00000516233 93 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC104986.1-201ENST00000517978 436 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 PHBP17-201ENST00000528576 541 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC023050.3-201ENST00000541142 333 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 ZNF322P1-201ENST00000568013 1209 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 OR7E18P-201ENST00000592589 702 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AL592436.1-201ENST00000605135 558 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC096772.1-201ENST00000609146 564 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC132825.8-201ENST00000640783 297 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RBMY1HP-201ENST00000382759 1389 ntBASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms