Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL137072.1-201ENST00000603444 466 ntBASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 SUPT16HP1-201ENST00000537175 3133 ntBASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 SNORA57.3-201ENST00000411095 141 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 MTCO3P21-201ENST00000430791 643 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 BX119904.1-201ENST00000432026 348 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AL035458.1-201ENST00000433096 585 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC099063.2-201ENST00000446360 662 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 ABCF2P2-201ENST00000450549 296 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC243772.1-201ENST00000451620 410 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC112206.1-201ENST00000468416 477 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
SHROOM4Q9ULL8 RNU6-185P-201ENST00000384421 107 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 ATP5F1P4-201ENST00000397288 746 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 XKRYP4-201ENST00000414395 483 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 TRGV6-201ENST00000417928 299 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC068533.1-201ENST00000418542 415 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 XKRYP5-201ENST00000449659 483 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 HMGB1P26-201ENST00000452520 628 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 KRT19P6-201ENST00000510983 209 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 VTA1P2-201ENST00000520205 911 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC084759.1-201ENST00000561168 290 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL109741.3-201ENST00000561748 592 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 MIR548Y-201ENST00000582739 110 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AP002967.1-201ENST00000624203 539 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 FRG1DP-201ENST00000635586 771 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 MIR142-201ENST00000384835 87 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 HMGB1P13-201ENST00000406019 642 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 UBE2Q2P12-201ENST00000414573 204 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 CLIC4P1-201ENST00000453177 535 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL445433.1-201ENST00000457507 257 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC110792.1-201ENST00000491826 472 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC108145.1-201ENST00000503770 153 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 MIR5195-201ENST00000583555 115 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC124856.1-201ENST00000600819 896 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL606490.9-201ENST00000603331 271 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AL592436.1-201ENST00000605135 558 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC024023.1-201ENST00000624530 922 ntBASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC7.87□□□□□ -1.15
SHROOM4Q9ULL8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AC093591.2-201ENST00000565254 3843 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 BX005019.1-201ENST00000561881 1810 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 Y_RNA.111-201ENST00000363248 100 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AL590704.1-201ENST00000402856 794 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AL078604.1-201ENST00000404609 466 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms